Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
TRAF3IP1Q8TDR0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAF3IP1Q8TDR0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAF3IP1Q8TDR0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRAF3IP1Q8TDR0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
TRAF3IP1Q8TDR0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAF3IP1Q8TDR0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAF3IP1Q8TDR0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAF3IP1Q8TDR0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRAF3IP1Q8TDR0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRAF3IP1Q8TDR0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAF3IP1Q8TDR0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.73■■□□□ 1.07
TRAF3IP1Q8TDR0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAF3IP1Q8TDR0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
TRAF3IP1Q8TDR0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRAF3IP1Q8TDR0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAF3IP1Q8TDR0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRAF3IP1Q8TDR0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.73■■□□□ 1.07
TRAF3IP1Q8TDR0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAF3IP1Q8TDR0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAF3IP1Q8TDR0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAF3IP1Q8TDR0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAF3IP1Q8TDR0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
TRAF3IP1Q8TDR0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAF3IP1Q8TDR0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRAF3IP1Q8TDR0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRAF3IP1Q8TDR0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TRAF3IP1Q8TDR0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.72■■□□□ 1.07
TRAF3IP1Q8TDR0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRAF3IP1Q8TDR0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.72■■□□□ 1.07
TRAF3IP1Q8TDR0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAF3IP1Q8TDR0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.72■■□□□ 1.07
TRAF3IP1Q8TDR0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
TRAF3IP1Q8TDR0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRAF3IP1Q8TDR0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAF3IP1Q8TDR0 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAF3IP1Q8TDR0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAF3IP1Q8TDR0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAF3IP1Q8TDR0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAF3IP1Q8TDR0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.72■■□□□ 1.07
TRAF3IP1Q8TDR0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAF3IP1Q8TDR0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRAF3IP1Q8TDR0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.71■■□□□ 1.07
TRAF3IP1Q8TDR0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.71■■□□□ 1.07
TRAF3IP1Q8TDR0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRAF3IP1Q8TDR0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRAF3IP1Q8TDR0 AC079140.4-201ENST00000507448 529 ntBASIC21.71■■□□□ 1.07
TRAF3IP1Q8TDR0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
TRAF3IP1Q8TDR0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.71■■□□□ 1.07
TRAF3IP1Q8TDR0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.71■■□□□ 1.07
TRAF3IP1Q8TDR0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRAF3IP1Q8TDR0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRAF3IP1Q8TDR0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.71■■□□□ 1.07
TRAF3IP1Q8TDR0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRAF3IP1Q8TDR0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAF3IP1Q8TDR0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
TRAF3IP1Q8TDR0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.7■■□□□ 1.06
TRAF3IP1Q8TDR0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRAF3IP1Q8TDR0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRAF3IP1Q8TDR0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.06
TRAF3IP1Q8TDR0 AC053503.5-201ENST00000601508 636 ntBASIC21.7■■□□□ 1.06
TRAF3IP1Q8TDR0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TRAF3IP1Q8TDR0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
TRAF3IP1Q8TDR0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAF3IP1Q8TDR0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.7■■□□□ 1.06
TRAF3IP1Q8TDR0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAF3IP1Q8TDR0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.69■■□□□ 1.06
TRAF3IP1Q8TDR0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TRAF3IP1Q8TDR0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
TRAF3IP1Q8TDR0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRAF3IP1Q8TDR0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAF3IP1Q8TDR0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRAF3IP1Q8TDR0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAF3IP1Q8TDR0 AC027612.3-201ENST00000413684 1047 ntBASIC21.69■■□□□ 1.06
TRAF3IP1Q8TDR0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.69■■□□□ 1.06
TRAF3IP1Q8TDR0 EEF1DP3-203ENST00000566025 782 ntBASIC21.69■■□□□ 1.06
TRAF3IP1Q8TDR0 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.69■■□□□ 1.06
TRAF3IP1Q8TDR0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAF3IP1Q8TDR0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRAF3IP1Q8TDR0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.68■■□□□ 1.06
TRAF3IP1Q8TDR0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.68■■□□□ 1.06
TRAF3IP1Q8TDR0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TRAF3IP1Q8TDR0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRAF3IP1Q8TDR0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
TRAF3IP1Q8TDR0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.68■■□□□ 1.06
TRAF3IP1Q8TDR0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.68■■□□□ 1.06
TRAF3IP1Q8TDR0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.68■■□□□ 1.06
TRAF3IP1Q8TDR0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRAF3IP1Q8TDR0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRAF3IP1Q8TDR0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRAF3IP1Q8TDR0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.68■■□□□ 1.06
TRAF3IP1Q8TDR0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRAF3IP1Q8TDR0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRAF3IP1Q8TDR0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
TRAF3IP1Q8TDR0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRAF3IP1Q8TDR0 KRT87P-202ENST00000534226 1464 ntBASIC21.67■■□□□ 1.06
TRAF3IP1Q8TDR0 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.67■■□□□ 1.06
TRAF3IP1Q8TDR0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRAF3IP1Q8TDR0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRAF3IP1Q8TDR0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms