Protein–RNA interactions for Protein: Q8TDG2

ACTRT1, Actin-related protein T1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTRT1Q8TDG2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.79■■□□□ 1.08
ACTRT1Q8TDG2 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.79■■□□□ 1.08
ACTRT1Q8TDG2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
ACTRT1Q8TDG2 MIR4466-201ENST00000606121 54 ntBASIC21.79■■□□□ 1.08
ACTRT1Q8TDG2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ACTRT1Q8TDG2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ACTRT1Q8TDG2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
ACTRT1Q8TDG2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
ACTRT1Q8TDG2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ACTRT1Q8TDG2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.79■■□□□ 1.08
ACTRT1Q8TDG2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ACTRT1Q8TDG2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ACTRT1Q8TDG2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.79■■□□□ 1.08
ACTRT1Q8TDG2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ACTRT1Q8TDG2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ACTRT1Q8TDG2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ACTRT1Q8TDG2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.79■■□□□ 1.08
ACTRT1Q8TDG2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.79■■□□□ 1.08
ACTRT1Q8TDG2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ACTRT1Q8TDG2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
ACTRT1Q8TDG2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.78■■□□□ 1.08
ACTRT1Q8TDG2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ACTRT1Q8TDG2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ACTRT1Q8TDG2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ACTRT1Q8TDG2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ACTRT1Q8TDG2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.78■■□□□ 1.08
ACTRT1Q8TDG2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ACTRT1Q8TDG2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.78■■□□□ 1.08
ACTRT1Q8TDG2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.78■■□□□ 1.08
ACTRT1Q8TDG2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ACTRT1Q8TDG2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ACTRT1Q8TDG2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ACTRT1Q8TDG2 AL162377.1-201ENST00000618844 1793 ntBASIC21.78■■□□□ 1.08
ACTRT1Q8TDG2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ACTRT1Q8TDG2 AL391422.3-201ENST00000603791 2761 ntBASIC21.78■■□□□ 1.08
ACTRT1Q8TDG2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.78■■□□□ 1.08
ACTRT1Q8TDG2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ACTRT1Q8TDG2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
ACTRT1Q8TDG2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
ACTRT1Q8TDG2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
ACTRT1Q8TDG2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.77■■□□□ 1.08
ACTRT1Q8TDG2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.77■■□□□ 1.08
ACTRT1Q8TDG2 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
ACTRT1Q8TDG2 AC007952.6-201ENST00000573168 2673 ntBASIC21.77■■□□□ 1.08
ACTRT1Q8TDG2 AC003957.1-201ENST00000625108 2673 ntBASIC21.77■■□□□ 1.08
ACTRT1Q8TDG2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ACTRT1Q8TDG2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
ACTRT1Q8TDG2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.77■■□□□ 1.07
ACTRT1Q8TDG2 AC055733.4-201ENST00000638462 1354 ntBASIC21.76■■□□□ 1.07
ACTRT1Q8TDG2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ACTRT1Q8TDG2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ACTRT1Q8TDG2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ACTRT1Q8TDG2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
ACTRT1Q8TDG2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ACTRT1Q8TDG2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
ACTRT1Q8TDG2 AC009237.3-201ENST00000393279 1427 ntBASIC21.76■■□□□ 1.07
ACTRT1Q8TDG2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ACTRT1Q8TDG2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.76■■□□□ 1.07
ACTRT1Q8TDG2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.76■■□□□ 1.07
ACTRT1Q8TDG2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
ACTRT1Q8TDG2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
ACTRT1Q8TDG2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ACTRT1Q8TDG2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ACTRT1Q8TDG2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.76■■□□□ 1.07
ACTRT1Q8TDG2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
ACTRT1Q8TDG2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.75■■□□□ 1.07
ACTRT1Q8TDG2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
ACTRT1Q8TDG2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ACTRT1Q8TDG2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ACTRT1Q8TDG2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
ACTRT1Q8TDG2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ACTRT1Q8TDG2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ACTRT1Q8TDG2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ACTRT1Q8TDG2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ACTRT1Q8TDG2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
ACTRT1Q8TDG2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
ACTRT1Q8TDG2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
ACTRT1Q8TDG2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.75■■□□□ 1.07
ACTRT1Q8TDG2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.75■■□□□ 1.07
ACTRT1Q8TDG2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
ACTRT1Q8TDG2 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
ACTRT1Q8TDG2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ACTRT1Q8TDG2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.75■■□□□ 1.07
ACTRT1Q8TDG2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ACTRT1Q8TDG2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.75■■□□□ 1.07
ACTRT1Q8TDG2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
ACTRT1Q8TDG2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ACTRT1Q8TDG2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
ACTRT1Q8TDG2 AFG3L1P-217ENST00000557444 2447 ntBASIC21.74■■□□□ 1.07
ACTRT1Q8TDG2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.74■■□□□ 1.07
ACTRT1Q8TDG2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.74■■□□□ 1.07
ACTRT1Q8TDG2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ACTRT1Q8TDG2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ACTRT1Q8TDG2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
ACTRT1Q8TDG2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
ACTRT1Q8TDG2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
ACTRT1Q8TDG2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ACTRT1Q8TDG2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
ACTRT1Q8TDG2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ACTRT1Q8TDG2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms