Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.3■□□□□ 0.52
RPS4Y2Q8TD47 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPS4Y2Q8TD47 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPS4Y2Q8TD47 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPS4Y2Q8TD47 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPS4Y2Q8TD47 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPS4Y2Q8TD47 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RPS4Y2Q8TD47 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RPS4Y2Q8TD47 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RPS4Y2Q8TD47 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPS4Y2Q8TD47 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RPS4Y2Q8TD47 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPS4Y2Q8TD47 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
RPS4Y2Q8TD47 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPS4Y2Q8TD47 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.29■□□□□ 0.52
RPS4Y2Q8TD47 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.29■□□□□ 0.52
RPS4Y2Q8TD47 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.29■□□□□ 0.52
RPS4Y2Q8TD47 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RPS4Y2Q8TD47 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPS4Y2Q8TD47 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPS4Y2Q8TD47 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPS4Y2Q8TD47 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
RPS4Y2Q8TD47 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
RPS4Y2Q8TD47 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPS4Y2Q8TD47 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPS4Y2Q8TD47 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPS4Y2Q8TD47 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPS4Y2Q8TD47 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.29■□□□□ 0.52
RPS4Y2Q8TD47 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPS4Y2Q8TD47 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPS4Y2Q8TD47 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.29■□□□□ 0.52
RPS4Y2Q8TD47 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPS4Y2Q8TD47 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPS4Y2Q8TD47 AC055733.4-201ENST00000638462 1354 ntBASIC18.29■□□□□ 0.52
RPS4Y2Q8TD47 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPS4Y2Q8TD47 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RPS4Y2Q8TD47 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.28■□□□□ 0.52
RPS4Y2Q8TD47 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS4Y2Q8TD47 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS4Y2Q8TD47 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.28■□□□□ 0.52
RPS4Y2Q8TD47 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.28■□□□□ 0.52
RPS4Y2Q8TD47 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.28■□□□□ 0.52
RPS4Y2Q8TD47 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.28■□□□□ 0.52
RPS4Y2Q8TD47 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.28■□□□□ 0.52
RPS4Y2Q8TD47 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS4Y2Q8TD47 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS4Y2Q8TD47 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS4Y2Q8TD47 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS4Y2Q8TD47 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RPS4Y2Q8TD47 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS4Y2Q8TD47 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.27■□□□□ 0.52
RPS4Y2Q8TD47 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RPS4Y2Q8TD47 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RPS4Y2Q8TD47 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.27■□□□□ 0.52
RPS4Y2Q8TD47 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPS4Y2Q8TD47 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RPS4Y2Q8TD47 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPS4Y2Q8TD47 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPS4Y2Q8TD47 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RPS4Y2Q8TD47 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
RPS4Y2Q8TD47 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
RPS4Y2Q8TD47 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.27■□□□□ 0.52
RPS4Y2Q8TD47 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.27■□□□□ 0.52
RPS4Y2Q8TD47 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
RPS4Y2Q8TD47 MIR4466-201ENST00000606121 54 ntBASIC18.27■□□□□ 0.52
RPS4Y2Q8TD47 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RPS4Y2Q8TD47 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
RPS4Y2Q8TD47 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.27■□□□□ 0.52
RPS4Y2Q8TD47 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RPS4Y2Q8TD47 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RPS4Y2Q8TD47 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
RPS4Y2Q8TD47 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.27■□□□□ 0.51
RPS4Y2Q8TD47 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.27■□□□□ 0.51
RPS4Y2Q8TD47 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RPS4Y2Q8TD47 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.27■□□□□ 0.51
RPS4Y2Q8TD47 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.27■□□□□ 0.51
RPS4Y2Q8TD47 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPS4Y2Q8TD47 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RPS4Y2Q8TD47 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
RPS4Y2Q8TD47 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPS4Y2Q8TD47 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RPS4Y2Q8TD47 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPS4Y2Q8TD47 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.26■□□□□ 0.51
RPS4Y2Q8TD47 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.26■□□□□ 0.51
RPS4Y2Q8TD47 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.26■□□□□ 0.51
RPS4Y2Q8TD47 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.26■□□□□ 0.51
RPS4Y2Q8TD47 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RPS4Y2Q8TD47 BX005040.4-201ENST00000637145 1518 ntBASIC18.26■□□□□ 0.51
RPS4Y2Q8TD47 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.26■□□□□ 0.51
RPS4Y2Q8TD47 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.26■□□□□ 0.51
RPS4Y2Q8TD47 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RPS4Y2Q8TD47 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPS4Y2Q8TD47 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPS4Y2Q8TD47 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RPS4Y2Q8TD47 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.26■□□□□ 0.51
RPS4Y2Q8TD47 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RPS4Y2Q8TD47 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RPS4Y2Q8TD47 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPS4Y2Q8TD47 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
RPS4Y2Q8TD47 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms