Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SHKBP1Q8TBC3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22■■□□□ 1.11
SHKBP1Q8TBC3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SHKBP1Q8TBC3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22■■□□□ 1.11
SHKBP1Q8TBC3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC22■■□□□ 1.11
SHKBP1Q8TBC3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SHKBP1Q8TBC3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22■■□□□ 1.11
SHKBP1Q8TBC3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SHKBP1Q8TBC3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
SHKBP1Q8TBC3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
SHKBP1Q8TBC3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
SHKBP1Q8TBC3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
SHKBP1Q8TBC3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC22■■□□□ 1.11
SHKBP1Q8TBC3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC22■■□□□ 1.11
SHKBP1Q8TBC3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22■■□□□ 1.11
SHKBP1Q8TBC3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22■■□□□ 1.11
SHKBP1Q8TBC3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22■■□□□ 1.11
SHKBP1Q8TBC3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
SHKBP1Q8TBC3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SHKBP1Q8TBC3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SHKBP1Q8TBC3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.99■■□□□ 1.11
SHKBP1Q8TBC3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.99■■□□□ 1.11
SHKBP1Q8TBC3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SHKBP1Q8TBC3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.99■■□□□ 1.11
SHKBP1Q8TBC3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SHKBP1Q8TBC3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.99■■□□□ 1.11
SHKBP1Q8TBC3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SHKBP1Q8TBC3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SHKBP1Q8TBC3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.99■■□□□ 1.11
SHKBP1Q8TBC3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
SHKBP1Q8TBC3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
SHKBP1Q8TBC3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SHKBP1Q8TBC3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SHKBP1Q8TBC3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.98■■□□□ 1.11
SHKBP1Q8TBC3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SHKBP1Q8TBC3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.98■■□□□ 1.11
SHKBP1Q8TBC3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.98■■□□□ 1.11
SHKBP1Q8TBC3 AC092118.2-201ENST00000613495 667 ntBASIC21.98■■□□□ 1.11
SHKBP1Q8TBC3 AC092053.2-201ENST00000640557 1818 ntBASIC21.98■■□□□ 1.11
SHKBP1Q8TBC3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SHKBP1Q8TBC3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.98■■□□□ 1.11
SHKBP1Q8TBC3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SHKBP1Q8TBC3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.98■■□□□ 1.11
SHKBP1Q8TBC3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SHKBP1Q8TBC3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SHKBP1Q8TBC3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.97■■□□□ 1.11
SHKBP1Q8TBC3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
SHKBP1Q8TBC3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.97■■□□□ 1.11
SHKBP1Q8TBC3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
SHKBP1Q8TBC3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
SHKBP1Q8TBC3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.97■■□□□ 1.11
SHKBP1Q8TBC3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.97■■□□□ 1.11
SHKBP1Q8TBC3 BX276092.2-201ENST00000417668 665 ntBASIC21.97■■□□□ 1.11
SHKBP1Q8TBC3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SHKBP1Q8TBC3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.97■■□□□ 1.11
SHKBP1Q8TBC3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SHKBP1Q8TBC3 AL591742.1-201ENST00000604433 565 ntBASIC21.97■■□□□ 1.11
SHKBP1Q8TBC3 AC243732.1-201ENST00000612648 864 ntBASIC21.97■■□□□ 1.11
SHKBP1Q8TBC3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SHKBP1Q8TBC3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.97■■□□□ 1.11
SHKBP1Q8TBC3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHKBP1Q8TBC3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SHKBP1Q8TBC3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.96■■□□□ 1.11
SHKBP1Q8TBC3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SHKBP1Q8TBC3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SHKBP1Q8TBC3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.96■■□□□ 1.11
SHKBP1Q8TBC3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.96■■□□□ 1.11
SHKBP1Q8TBC3 FAM201B-201ENST00000458407 597 ntBASIC21.96■■□□□ 1.11
SHKBP1Q8TBC3 AL162412.1-201ENST00000567129 965 ntBASIC21.96■■□□□ 1.11
SHKBP1Q8TBC3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.96■■□□□ 1.11
SHKBP1Q8TBC3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHKBP1Q8TBC3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SHKBP1Q8TBC3 AL137060.1-201ENST00000618151 2648 ntBASIC21.96■■□□□ 1.11
SHKBP1Q8TBC3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHKBP1Q8TBC3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHKBP1Q8TBC3 AC080038.3-201ENST00000623346 1952 ntBASIC21.96■■□□□ 1.11
SHKBP1Q8TBC3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHKBP1Q8TBC3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
SHKBP1Q8TBC3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
SHKBP1Q8TBC3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHKBP1Q8TBC3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHKBP1Q8TBC3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SHKBP1Q8TBC3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.95■■□□□ 1.1
SHKBP1Q8TBC3 RNA5SP413-201ENST00000516373 109 ntBASIC21.95■■□□□ 1.1
SHKBP1Q8TBC3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.95■■□□□ 1.1
SHKBP1Q8TBC3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHKBP1Q8TBC3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.95■■□□□ 1.1
SHKBP1Q8TBC3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SHKBP1Q8TBC3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SHKBP1Q8TBC3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SHKBP1Q8TBC3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.94■■□□□ 1.1
SHKBP1Q8TBC3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SHKBP1Q8TBC3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SHKBP1Q8TBC3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.94■■□□□ 1.1
SHKBP1Q8TBC3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.94■■□□□ 1.1
SHKBP1Q8TBC3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.94■■□□□ 1.1
SHKBP1Q8TBC3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.94■■□□□ 1.1
SHKBP1Q8TBC3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHKBP1Q8TBC3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SHKBP1Q8TBC3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms