Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGCLL1Q8TB92 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGCLL1Q8TB92 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
HMGCLL1Q8TB92 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
HMGCLL1Q8TB92 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.53■□□□□ 0.88
HMGCLL1Q8TB92 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.53■□□□□ 0.88
HMGCLL1Q8TB92 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HMGCLL1Q8TB92 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.53■□□□□ 0.88
HMGCLL1Q8TB92 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.53■□□□□ 0.88
HMGCLL1Q8TB92 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.53■□□□□ 0.88
HMGCLL1Q8TB92 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.53■□□□□ 0.88
HMGCLL1Q8TB92 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.53■□□□□ 0.88
HMGCLL1Q8TB92 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGCLL1Q8TB92 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HMGCLL1Q8TB92 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGCLL1Q8TB92 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HMGCLL1Q8TB92 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
HMGCLL1Q8TB92 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMGCLL1Q8TB92 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.52■□□□□ 0.88
HMGCLL1Q8TB92 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.52■□□□□ 0.88
HMGCLL1Q8TB92 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMGCLL1Q8TB92 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMGCLL1Q8TB92 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMGCLL1Q8TB92 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.52■□□□□ 0.88
HMGCLL1Q8TB92 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.52■□□□□ 0.88
HMGCLL1Q8TB92 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.52■□□□□ 0.88
HMGCLL1Q8TB92 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.52■□□□□ 0.88
HMGCLL1Q8TB92 AC104564.3-201ENST00000582367 638 ntBASIC20.52■□□□□ 0.88
HMGCLL1Q8TB92 KRT18P61-201ENST00000585825 1298 ntBASIC20.52■□□□□ 0.88
HMGCLL1Q8TB92 NTF6G-201ENST00000591094 616 ntBASIC20.52■□□□□ 0.88
HMGCLL1Q8TB92 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HMGCLL1Q8TB92 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
HMGCLL1Q8TB92 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMGCLL1Q8TB92 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMGCLL1Q8TB92 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMGCLL1Q8TB92 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
HMGCLL1Q8TB92 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HMGCLL1Q8TB92 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
HMGCLL1Q8TB92 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.87
HMGCLL1Q8TB92 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HMGCLL1Q8TB92 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HMGCLL1Q8TB92 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
HMGCLL1Q8TB92 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
HMGCLL1Q8TB92 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.51■□□□□ 0.87
HMGCLL1Q8TB92 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HMGCLL1Q8TB92 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.51■□□□□ 0.87
HMGCLL1Q8TB92 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
HMGCLL1Q8TB92 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.51■□□□□ 0.87
HMGCLL1Q8TB92 KRT18P5-201ENST00000436075 1291 ntBASIC20.51■□□□□ 0.87
HMGCLL1Q8TB92 AL162430.1-201ENST00000480705 870 ntBASIC20.51■□□□□ 0.87
HMGCLL1Q8TB92 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.51■□□□□ 0.87
HMGCLL1Q8TB92 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.51■□□□□ 0.87
HMGCLL1Q8TB92 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.51■□□□□ 0.87
HMGCLL1Q8TB92 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HMGCLL1Q8TB92 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HMGCLL1Q8TB92 AC004854.2-201ENST00000608450 1441 ntBASIC20.51■□□□□ 0.87
HMGCLL1Q8TB92 LINC01006-201ENST00000333319 2292 ntBASIC20.51■□□□□ 0.87
HMGCLL1Q8TB92 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMGCLL1Q8TB92 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.51■□□□□ 0.87
HMGCLL1Q8TB92 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HMGCLL1Q8TB92 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.5■□□□□ 0.87
HMGCLL1Q8TB92 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.5■□□□□ 0.87
HMGCLL1Q8TB92 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HMGCLL1Q8TB92 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGCLL1Q8TB92 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGCLL1Q8TB92 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGCLL1Q8TB92 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.5■□□□□ 0.87
HMGCLL1Q8TB92 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.5■□□□□ 0.87
HMGCLL1Q8TB92 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.5■□□□□ 0.87
HMGCLL1Q8TB92 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGCLL1Q8TB92 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HMGCLL1Q8TB92 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.5■□□□□ 0.87
HMGCLL1Q8TB92 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.5■□□□□ 0.87
HMGCLL1Q8TB92 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.49■□□□□ 0.87
HMGCLL1Q8TB92 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGCLL1Q8TB92 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGCLL1Q8TB92 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
HMGCLL1Q8TB92 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGCLL1Q8TB92 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGCLL1Q8TB92 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGCLL1Q8TB92 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.49■□□□□ 0.87
HMGCLL1Q8TB92 AC138907.5-202ENST00000569484 235 ntBASIC20.49■□□□□ 0.87
HMGCLL1Q8TB92 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.49■□□□□ 0.87
HMGCLL1Q8TB92 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.49■□□□□ 0.87
HMGCLL1Q8TB92 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
HMGCLL1Q8TB92 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.49■□□□□ 0.87
HMGCLL1Q8TB92 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HMGCLL1Q8TB92 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.49■□□□□ 0.87
HMGCLL1Q8TB92 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.49■□□□□ 0.87
HMGCLL1Q8TB92 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGCLL1Q8TB92 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGCLL1Q8TB92 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.48■□□□□ 0.87
HMGCLL1Q8TB92 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HMGCLL1Q8TB92 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGCLL1Q8TB92 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGCLL1Q8TB92 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HMGCLL1Q8TB92 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HMGCLL1Q8TB92 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.48■□□□□ 0.87
HMGCLL1Q8TB92 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.48■□□□□ 0.87
HMGCLL1Q8TB92 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms