Protein–RNA interactions for Protein: Q8NG48

LINS1, Protein Lines homolog 1, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1Q8NG48 AC244015.2-201ENST00000616358 1861 ntBASIC26.3■■□□□ 1.8
LINS1Q8NG48 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
LINS1Q8NG48 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC26.29■■□□□ 1.8
LINS1Q8NG48 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.8
LINS1Q8NG48 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
LINS1Q8NG48 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
LINS1Q8NG48 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC26.29■■□□□ 1.8
LINS1Q8NG48 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC26.29■■□□□ 1.8
LINS1Q8NG48 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC26.29■■□□□ 1.8
LINS1Q8NG48 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
LINS1Q8NG48 AL512625.2-201ENST00000417533 625 ntBASIC26.29■■□□□ 1.8
LINS1Q8NG48 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC26.29■■□□□ 1.8
LINS1Q8NG48 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC26.29■■□□□ 1.8
LINS1Q8NG48 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC26.29■■□□□ 1.8
LINS1Q8NG48 MARS-234ENST00000630571 216 ntTSL 5 BASIC26.29■■□□□ 1.8
LINS1Q8NG48 MARS-235ENST00000630803 183 ntTSL 3 BASIC26.29■■□□□ 1.8
LINS1Q8NG48 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC26.29■■□□□ 1.8
LINS1Q8NG48 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC26.29■■□□□ 1.8
LINS1Q8NG48 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
LINS1Q8NG48 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
LINS1Q8NG48 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
LINS1Q8NG48 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
LINS1Q8NG48 AC093787.1-201ENST00000450396 207 ntBASIC26.28■■□□□ 1.8
LINS1Q8NG48 RARRES2P4-201ENST00000514074 484 ntBASIC26.28■■□□□ 1.8
LINS1Q8NG48 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC26.28■■□□□ 1.8
LINS1Q8NG48 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC26.28■■□□□ 1.8
LINS1Q8NG48 AC008694.1-202ENST00000636953 945 ntBASIC26.28■■□□□ 1.8
LINS1Q8NG48 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
LINS1Q8NG48 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
LINS1Q8NG48 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
LINS1Q8NG48 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
LINS1Q8NG48 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC26.27■■□□□ 1.8
LINS1Q8NG48 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC26.27■■□□□ 1.8
LINS1Q8NG48 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC26.27■■□□□ 1.8
LINS1Q8NG48 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
LINS1Q8NG48 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC26.27■■□□□ 1.8
LINS1Q8NG48 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
LINS1Q8NG48 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
LINS1Q8NG48 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
LINS1Q8NG48 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
LINS1Q8NG48 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
LINS1Q8NG48 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC26.27■■□□□ 1.8
LINS1Q8NG48 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
LINS1Q8NG48 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
LINS1Q8NG48 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
LINS1Q8NG48 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
LINS1Q8NG48 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
LINS1Q8NG48 SLC29A4P1-201ENST00000398760 971 ntBASIC26.26■■□□□ 1.79
LINS1Q8NG48 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
LINS1Q8NG48 PBX1-209ENST00000485769 834 ntTSL 2 BASIC26.26■■□□□ 1.79
LINS1Q8NG48 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
LINS1Q8NG48 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
LINS1Q8NG48 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
LINS1Q8NG48 AL138781.1-201ENST00000566567 1274 ntBASIC26.25■■□□□ 1.79
LINS1Q8NG48 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
LINS1Q8NG48 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
LINS1Q8NG48 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC26.24■■□□□ 1.79
LINS1Q8NG48 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LINS1Q8NG48 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
LINS1Q8NG48 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
LINS1Q8NG48 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
LINS1Q8NG48 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LINS1Q8NG48 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC26.24■■□□□ 1.79
LINS1Q8NG48 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC26.24■■□□□ 1.79
LINS1Q8NG48 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC26.24■■□□□ 1.79
LINS1Q8NG48 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC26.24■■□□□ 1.79
LINS1Q8NG48 FBXW4P1-201ENST00000426721 2239 ntBASIC26.24■■□□□ 1.79
LINS1Q8NG48 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LINS1Q8NG48 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
LINS1Q8NG48 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC26.23■■□□□ 1.79
LINS1Q8NG48 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC26.23■■□□□ 1.79
LINS1Q8NG48 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC26.23■■□□□ 1.79
LINS1Q8NG48 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
LINS1Q8NG48 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
LINS1Q8NG48 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC26.23■■□□□ 1.79
LINS1Q8NG48 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
LINS1Q8NG48 STK25-234ENST00000535007 2459 ntTSL 2 BASIC26.23■■□□□ 1.79
LINS1Q8NG48 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
LINS1Q8NG48 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
LINS1Q8NG48 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
LINS1Q8NG48 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC26.23■■□□□ 1.79
LINS1Q8NG48 FAM21FP-204ENST00000608637 956 ntBASIC26.23■■□□□ 1.79
LINS1Q8NG48 PFKL-212ENST00000628044 129 ntTSL 3 BASIC26.23■■□□□ 1.79
LINS1Q8NG48 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
LINS1Q8NG48 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
LINS1Q8NG48 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC26.23■■□□□ 1.79
LINS1Q8NG48 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
LINS1Q8NG48 MKRN4P-201ENST00000444706 1521 ntBASIC26.23■■□□□ 1.79
LINS1Q8NG48 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
LINS1Q8NG48 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC26.22■■□□□ 1.79
LINS1Q8NG48 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
LINS1Q8NG48 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC26.22■■□□□ 1.79
LINS1Q8NG48 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC26.22■■□□□ 1.79
LINS1Q8NG48 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC26.22■■□□□ 1.79
LINS1Q8NG48 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC26.22■■□□□ 1.79
LINS1Q8NG48 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC26.22■■□□□ 1.79
LINS1Q8NG48 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
LINS1Q8NG48 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
LINS1Q8NG48 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
LINS1Q8NG48 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms