Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRFBP1Q8NEF9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRFBP1Q8NEF9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SRFBP1Q8NEF9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.95■□□□□ 0.78
SRFBP1Q8NEF9 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SRFBP1Q8NEF9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRFBP1Q8NEF9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SRFBP1Q8NEF9 NTF6G-201ENST00000591094 616 ntBASIC19.95■□□□□ 0.78
SRFBP1Q8NEF9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.95■□□□□ 0.78
SRFBP1Q8NEF9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SRFBP1Q8NEF9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRFBP1Q8NEF9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SRFBP1Q8NEF9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.94■□□□□ 0.78
SRFBP1Q8NEF9 KRT16P2-201ENST00000414673 1423 ntBASIC19.94■□□□□ 0.78
SRFBP1Q8NEF9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRFBP1Q8NEF9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRFBP1Q8NEF9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.94■□□□□ 0.78
SRFBP1Q8NEF9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.94■□□□□ 0.78
SRFBP1Q8NEF9 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.94■□□□□ 0.78
SRFBP1Q8NEF9 MIR5787-201ENST00000611784 55 ntBASIC19.94■□□□□ 0.78
SRFBP1Q8NEF9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SRFBP1Q8NEF9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRFBP1Q8NEF9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRFBP1Q8NEF9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRFBP1Q8NEF9 FEM1AP4-201ENST00000443167 1987 ntBASIC19.94■□□□□ 0.78
SRFBP1Q8NEF9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRFBP1Q8NEF9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRFBP1Q8NEF9 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRFBP1Q8NEF9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SRFBP1Q8NEF9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRFBP1Q8NEF9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRFBP1Q8NEF9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRFBP1Q8NEF9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SRFBP1Q8NEF9 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRFBP1Q8NEF9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRFBP1Q8NEF9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SRFBP1Q8NEF9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SRFBP1Q8NEF9 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SRFBP1Q8NEF9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SRFBP1Q8NEF9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRFBP1Q8NEF9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SRFBP1Q8NEF9 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRFBP1Q8NEF9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SRFBP1Q8NEF9 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRFBP1Q8NEF9 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
SRFBP1Q8NEF9 AC061975.6-201ENST00000579045 1553 ntBASIC19.92■□□□□ 0.78
SRFBP1Q8NEF9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.92■□□□□ 0.78
SRFBP1Q8NEF9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SRFBP1Q8NEF9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SRFBP1Q8NEF9 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.92■□□□□ 0.78
SRFBP1Q8NEF9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SRFBP1Q8NEF9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
SRFBP1Q8NEF9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SRFBP1Q8NEF9 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SRFBP1Q8NEF9 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SRFBP1Q8NEF9 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
SRFBP1Q8NEF9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SRFBP1Q8NEF9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SRFBP1Q8NEF9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SRFBP1Q8NEF9 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SRFBP1Q8NEF9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SRFBP1Q8NEF9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SRFBP1Q8NEF9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SRFBP1Q8NEF9 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SRFBP1Q8NEF9 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SRFBP1Q8NEF9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.91■□□□□ 0.78
SRFBP1Q8NEF9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SRFBP1Q8NEF9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SRFBP1Q8NEF9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SRFBP1Q8NEF9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.91■□□□□ 0.78
SRFBP1Q8NEF9 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SRFBP1Q8NEF9 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SRFBP1Q8NEF9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SRFBP1Q8NEF9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SRFBP1Q8NEF9 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SRFBP1Q8NEF9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SRFBP1Q8NEF9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
SRFBP1Q8NEF9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SRFBP1Q8NEF9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SRFBP1Q8NEF9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SRFBP1Q8NEF9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SRFBP1Q8NEF9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SRFBP1Q8NEF9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SRFBP1Q8NEF9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SRFBP1Q8NEF9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SRFBP1Q8NEF9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
SRFBP1Q8NEF9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SRFBP1Q8NEF9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SRFBP1Q8NEF9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.89■□□□□ 0.77
SRFBP1Q8NEF9 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SRFBP1Q8NEF9 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SRFBP1Q8NEF9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SRFBP1Q8NEF9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.89■□□□□ 0.77
SRFBP1Q8NEF9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.89■□□□□ 0.77
SRFBP1Q8NEF9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.89■□□□□ 0.77
SRFBP1Q8NEF9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SRFBP1Q8NEF9 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SRFBP1Q8NEF9 SLC7A5P1-201ENST00000568957 537 ntBASIC19.89■□□□□ 0.77
SRFBP1Q8NEF9 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SRFBP1Q8NEF9 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms