Protein–RNA interactions for Protein: Q8NCS7

SLC44A5, Choline transporter-like protein 5, humanhuman

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A5Q8NCS7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC24.67■■□□□ 1.54
SLC44A5Q8NCS7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SLC44A5Q8NCS7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SLC44A5Q8NCS7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SLC44A5Q8NCS7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SLC44A5Q8NCS7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC24.67■■□□□ 1.54
SLC44A5Q8NCS7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC24.67■■□□□ 1.54
SLC44A5Q8NCS7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
SLC44A5Q8NCS7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC24.67■■□□□ 1.54
SLC44A5Q8NCS7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC24.67■■□□□ 1.54
SLC44A5Q8NCS7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SLC44A5Q8NCS7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC24.67■■□□□ 1.54
SLC44A5Q8NCS7 RARRES2P4-201ENST00000514074 484 ntBASIC24.67■■□□□ 1.54
SLC44A5Q8NCS7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SLC44A5Q8NCS7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC24.67■■□□□ 1.54
SLC44A5Q8NCS7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC24.67■■□□□ 1.54
SLC44A5Q8NCS7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC24.67■■□□□ 1.54
SLC44A5Q8NCS7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC24.67■■□□□ 1.54
SLC44A5Q8NCS7 GOLGA2P6-201ENST00000340929 2049 ntBASIC24.67■■□□□ 1.54
SLC44A5Q8NCS7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SLC44A5Q8NCS7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SLC44A5Q8NCS7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SLC44A5Q8NCS7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC24.67■■□□□ 1.54
SLC44A5Q8NCS7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SLC44A5Q8NCS7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
SLC44A5Q8NCS7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC24.66■■□□□ 1.54
SLC44A5Q8NCS7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SLC44A5Q8NCS7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC24.66■■□□□ 1.54
SLC44A5Q8NCS7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC24.66■■□□□ 1.54
SLC44A5Q8NCS7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SLC44A5Q8NCS7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC24.66■■□□□ 1.54
SLC44A5Q8NCS7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SLC44A5Q8NCS7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SLC44A5Q8NCS7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
SLC44A5Q8NCS7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC24.65■■□□□ 1.54
SLC44A5Q8NCS7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
SLC44A5Q8NCS7 AC245052.3-201ENST00000450182 901 ntBASIC24.65■■□□□ 1.54
SLC44A5Q8NCS7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC24.65■■□□□ 1.54
SLC44A5Q8NCS7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC24.65■■□□□ 1.54
SLC44A5Q8NCS7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
SLC44A5Q8NCS7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
SLC44A5Q8NCS7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SLC44A5Q8NCS7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
SLC44A5Q8NCS7 AC012676.1-201ENST00000574705 1949 ntBASIC24.65■■□□□ 1.54
SLC44A5Q8NCS7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
SLC44A5Q8NCS7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SLC44A5Q8NCS7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
SLC44A5Q8NCS7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC24.64■■□□□ 1.54
SLC44A5Q8NCS7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.64■■□□□ 1.54
SLC44A5Q8NCS7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SLC44A5Q8NCS7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC24.64■■□□□ 1.54
SLC44A5Q8NCS7 AL512625.2-201ENST00000417533 625 ntBASIC24.64■■□□□ 1.54
SLC44A5Q8NCS7 AL162412.1-201ENST00000567129 965 ntBASIC24.64■■□□□ 1.54
SLC44A5Q8NCS7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC24.64■■□□□ 1.53
SLC44A5Q8NCS7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC24.64■■□□□ 1.53
SLC44A5Q8NCS7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SLC44A5Q8NCS7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
SLC44A5Q8NCS7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC24.63■■□□□ 1.53
SLC44A5Q8NCS7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SLC44A5Q8NCS7 AC010980.2-201ENST00000587099 1412 ntBASIC24.63■■□□□ 1.53
SLC44A5Q8NCS7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SLC44A5Q8NCS7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SLC44A5Q8NCS7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
SLC44A5Q8NCS7 BX276092.2-201ENST00000417668 665 ntBASIC24.63■■□□□ 1.53
SLC44A5Q8NCS7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC24.63■■□□□ 1.53
SLC44A5Q8NCS7 CD99P1-205ENST00000527459 561 ntBASIC24.63■■□□□ 1.53
SLC44A5Q8NCS7 KRT18P6-201ENST00000555540 1265 ntBASIC24.63■■□□□ 1.53
SLC44A5Q8NCS7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC24.63■■□□□ 1.53
SLC44A5Q8NCS7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC24.63■■□□□ 1.53
SLC44A5Q8NCS7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC24.63■■□□□ 1.53
SLC44A5Q8NCS7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SLC44A5Q8NCS7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SLC44A5Q8NCS7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC24.63■■□□□ 1.53
SLC44A5Q8NCS7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SLC44A5Q8NCS7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SLC44A5Q8NCS7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SLC44A5Q8NCS7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC24.62■■□□□ 1.53
SLC44A5Q8NCS7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
SLC44A5Q8NCS7 ABHD17AP1-201ENST00000358206 933 ntBASIC24.62■■□□□ 1.53
SLC44A5Q8NCS7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
SLC44A5Q8NCS7 PPP1R14BP2-201ENST00000426284 444 ntBASIC24.62■■□□□ 1.53
SLC44A5Q8NCS7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SLC44A5Q8NCS7 AC133041.1-202ENST00000642053 222 ntBASIC24.62■■□□□ 1.53
SLC44A5Q8NCS7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
SLC44A5Q8NCS7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SLC44A5Q8NCS7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SLC44A5Q8NCS7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.61■■□□□ 1.53
SLC44A5Q8NCS7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24.61■■□□□ 1.53
SLC44A5Q8NCS7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SLC44A5Q8NCS7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.61■■□□□ 1.53
SLC44A5Q8NCS7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
SLC44A5Q8NCS7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SLC44A5Q8NCS7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC24.61■■□□□ 1.53
SLC44A5Q8NCS7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SLC44A5Q8NCS7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SLC44A5Q8NCS7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC24.61■■□□□ 1.53
SLC44A5Q8NCS7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
SLC44A5Q8NCS7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SLC44A5Q8NCS7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
SLC44A5Q8NCS7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms