Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLDN22Q8N7P3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.02■□□□□ 0.63
CLDN22Q8N7P3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN22Q8N7P3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.01■□□□□ 0.63
CLDN22Q8N7P3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN22Q8N7P3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN22Q8N7P3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN22Q8N7P3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.01■□□□□ 0.63
CLDN22Q8N7P3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN22Q8N7P3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN22Q8N7P3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.01■□□□□ 0.63
CLDN22Q8N7P3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.01■□□□□ 0.63
CLDN22Q8N7P3 AP001330.3-201ENST00000520123 633 ntBASIC19.01■□□□□ 0.63
CLDN22Q8N7P3 IGHV3-19-201ENST00000521488 291 ntBASIC19.01■□□□□ 0.63
CLDN22Q8N7P3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.01■□□□□ 0.63
CLDN22Q8N7P3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN22Q8N7P3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN22Q8N7P3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.01■□□□□ 0.63
CLDN22Q8N7P3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CLDN22Q8N7P3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CLDN22Q8N7P3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
CLDN22Q8N7P3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.01■□□□□ 0.63
CLDN22Q8N7P3 GABARAPL3-202ENST00000624044 1851 ntBASIC19.01■□□□□ 0.63
CLDN22Q8N7P3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN22Q8N7P3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN22Q8N7P3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CLDN22Q8N7P3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN22Q8N7P3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLDN22Q8N7P3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLDN22Q8N7P3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN22Q8N7P3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19■□□□□ 0.63
CLDN22Q8N7P3 GRAMD4P2-201ENST00000423297 1097 ntBASIC19■□□□□ 0.63
CLDN22Q8N7P3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19■□□□□ 0.63
CLDN22Q8N7P3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLDN22Q8N7P3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19■□□□□ 0.63
CLDN22Q8N7P3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLDN22Q8N7P3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLDN22Q8N7P3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CLDN22Q8N7P3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19■□□□□ 0.63
CLDN22Q8N7P3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19■□□□□ 0.63
CLDN22Q8N7P3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN22Q8N7P3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN22Q8N7P3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN22Q8N7P3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN22Q8N7P3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN22Q8N7P3 TSPY26P-201ENST00000476365 1326 ntBASIC19■□□□□ 0.63
CLDN22Q8N7P3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN22Q8N7P3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.99■□□□□ 0.63
CLDN22Q8N7P3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.99■□□□□ 0.63
CLDN22Q8N7P3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN22Q8N7P3 RNF165-205ENST00000588679 2904 ntBASIC18.99■□□□□ 0.63
CLDN22Q8N7P3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN22Q8N7P3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN22Q8N7P3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.99■□□□□ 0.63
CLDN22Q8N7P3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN22Q8N7P3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN22Q8N7P3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.99■□□□□ 0.63
CLDN22Q8N7P3 AF213884.3-201ENST00000563833 479 ntBASIC18.99■□□□□ 0.63
CLDN22Q8N7P3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.99■□□□□ 0.63
CLDN22Q8N7P3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN22Q8N7P3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN22Q8N7P3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN22Q8N7P3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.98■□□□□ 0.63
CLDN22Q8N7P3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN22Q8N7P3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
CLDN22Q8N7P3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN22Q8N7P3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.98■□□□□ 0.63
CLDN22Q8N7P3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN22Q8N7P3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.98■□□□□ 0.63
CLDN22Q8N7P3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN22Q8N7P3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN22Q8N7P3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN22Q8N7P3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.98■□□□□ 0.63
CLDN22Q8N7P3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN22Q8N7P3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN22Q8N7P3 AC027682.1-201ENST00000562846 899 ntBASIC18.98■□□□□ 0.63
CLDN22Q8N7P3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
CLDN22Q8N7P3 AL031432.3-201ENST00000607698 485 ntBASIC18.98■□□□□ 0.63
CLDN22Q8N7P3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CLDN22Q8N7P3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN22Q8N7P3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.98■□□□□ 0.63
CLDN22Q8N7P3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.98■□□□□ 0.63
CLDN22Q8N7P3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CLDN22Q8N7P3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN22Q8N7P3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CLDN22Q8N7P3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN22Q8N7P3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN22Q8N7P3 AC009237.3-201ENST00000393279 1427 ntBASIC18.98■□□□□ 0.63
CLDN22Q8N7P3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN22Q8N7P3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.98■□□□□ 0.63
CLDN22Q8N7P3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.97■□□□□ 0.63
CLDN22Q8N7P3 AP005212.1-201ENST00000581547 1997 ntBASIC18.97■□□□□ 0.63
CLDN22Q8N7P3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN22Q8N7P3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN22Q8N7P3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CLDN22Q8N7P3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN22Q8N7P3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN22Q8N7P3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
CLDN22Q8N7P3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN22Q8N7P3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms