Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PAF1Q8N7H5 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PAF1Q8N7H5 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PAF1Q8N7H5 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PAF1Q8N7H5 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
PAF1Q8N7H5 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PAF1Q8N7H5 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.42■■□□□ 1.02
PAF1Q8N7H5 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PAF1Q8N7H5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.42■■□□□ 1.02
PAF1Q8N7H5 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.42■■□□□ 1.02
PAF1Q8N7H5 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PAF1Q8N7H5 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PAF1Q8N7H5 AC010542.4-201ENST00000563151 1910 ntBASIC21.42■■□□□ 1.02
PAF1Q8N7H5 AC026471.6-201ENST00000622954 1905 ntBASIC21.42■■□□□ 1.02
PAF1Q8N7H5 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
PAF1Q8N7H5 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.42■■□□□ 1.02
PAF1Q8N7H5 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PAF1Q8N7H5 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.41■■□□□ 1.02
PAF1Q8N7H5 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.41■■□□□ 1.02
PAF1Q8N7H5 AC003102.1-202ENST00000563394 1796 ntBASIC21.41■■□□□ 1.02
PAF1Q8N7H5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PAF1Q8N7H5 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PAF1Q8N7H5 AP004607.4-201ENST00000530158 1459 ntBASIC21.41■■□□□ 1.02
PAF1Q8N7H5 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.41■■□□□ 1.02
PAF1Q8N7H5 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PAF1Q8N7H5 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PAF1Q8N7H5 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.41■■□□□ 1.02
PAF1Q8N7H5 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PAF1Q8N7H5 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PAF1Q8N7H5 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PAF1Q8N7H5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
PAF1Q8N7H5 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
PAF1Q8N7H5 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.4■■□□□ 1.02
PAF1Q8N7H5 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PAF1Q8N7H5 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PAF1Q8N7H5 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.4■■□□□ 1.02
PAF1Q8N7H5 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.4■■□□□ 1.02
PAF1Q8N7H5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PAF1Q8N7H5 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC21.4■■□□□ 1.02
PAF1Q8N7H5 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.4■■□□□ 1.02
PAF1Q8N7H5 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
PAF1Q8N7H5 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PAF1Q8N7H5 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PAF1Q8N7H5 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PAF1Q8N7H5 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PAF1Q8N7H5 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PAF1Q8N7H5 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.39■■□□□ 1.02
PAF1Q8N7H5 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
PAF1Q8N7H5 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PAF1Q8N7H5 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PAF1Q8N7H5 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.39■■□□□ 1.01
PAF1Q8N7H5 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.39■■□□□ 1.01
PAF1Q8N7H5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PAF1Q8N7H5 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PAF1Q8N7H5 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PAF1Q8N7H5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.39■■□□□ 1.01
PAF1Q8N7H5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.39■■□□□ 1.01
PAF1Q8N7H5 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
PAF1Q8N7H5 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.38■■□□□ 1.01
PAF1Q8N7H5 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
PAF1Q8N7H5 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
PAF1Q8N7H5 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PAF1Q8N7H5 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PAF1Q8N7H5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PAF1Q8N7H5 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.38■■□□□ 1.01
PAF1Q8N7H5 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.38■■□□□ 1.01
PAF1Q8N7H5 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PAF1Q8N7H5 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.38■■□□□ 1.01
PAF1Q8N7H5 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.38■■□□□ 1.01
PAF1Q8N7H5 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.38■■□□□ 1.01
PAF1Q8N7H5 AL137784.2-201ENST00000607332 1000 ntBASIC21.38■■□□□ 1.01
PAF1Q8N7H5 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PAF1Q8N7H5 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
PAF1Q8N7H5 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PAF1Q8N7H5 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.38■■□□□ 1.01
PAF1Q8N7H5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PAF1Q8N7H5 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PAF1Q8N7H5 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PAF1Q8N7H5 CLDN5-201ENST00000403084 2357 ntBASIC21.38■■□□□ 1.01
PAF1Q8N7H5 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PAF1Q8N7H5 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PAF1Q8N7H5 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PAF1Q8N7H5 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
PAF1Q8N7H5 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PAF1Q8N7H5 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PAF1Q8N7H5 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
PAF1Q8N7H5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PAF1Q8N7H5 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.37■■□□□ 1.01
PAF1Q8N7H5 AC022517.1-201ENST00000592429 346 ntBASIC21.37■■□□□ 1.01
PAF1Q8N7H5 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.37■■□□□ 1.01
PAF1Q8N7H5 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
PAF1Q8N7H5 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
PAF1Q8N7H5 FBXW4P1-201ENST00000426721 2239 ntBASIC21.37■■□□□ 1.01
PAF1Q8N7H5 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PAF1Q8N7H5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.37■■□□□ 1.01
PAF1Q8N7H5 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PAF1Q8N7H5 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PAF1Q8N7H5 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PAF1Q8N7H5 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
PAF1Q8N7H5 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms