Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.82■□□□□ 0.76
ARHGEF39Q8N4T4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.82■□□□□ 0.76
ARHGEF39Q8N4T4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ARHGEF39Q8N4T4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
ARHGEF39Q8N4T4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.81■□□□□ 0.76
ARHGEF39Q8N4T4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.81■□□□□ 0.76
ARHGEF39Q8N4T4 Z98882.1-201ENST00000622160 2253 ntBASIC19.81■□□□□ 0.76
ARHGEF39Q8N4T4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARHGEF39Q8N4T4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ARHGEF39Q8N4T4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ARHGEF39Q8N4T4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.81■□□□□ 0.76
ARHGEF39Q8N4T4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.81■□□□□ 0.76
ARHGEF39Q8N4T4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ARHGEF39Q8N4T4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.81■□□□□ 0.76
ARHGEF39Q8N4T4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ARHGEF39Q8N4T4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ARHGEF39Q8N4T4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.81■□□□□ 0.76
ARHGEF39Q8N4T4 AC068338.2-201ENST00000563278 1430 ntBASIC19.81■□□□□ 0.76
ARHGEF39Q8N4T4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARHGEF39Q8N4T4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARHGEF39Q8N4T4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ARHGEF39Q8N4T4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.81■□□□□ 0.76
ARHGEF39Q8N4T4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ARHGEF39Q8N4T4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARHGEF39Q8N4T4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARHGEF39Q8N4T4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARHGEF39Q8N4T4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ARHGEF39Q8N4T4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.81■□□□□ 0.76
ARHGEF39Q8N4T4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.81■□□□□ 0.76
ARHGEF39Q8N4T4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ARHGEF39Q8N4T4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.8■□□□□ 0.76
ARHGEF39Q8N4T4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ARHGEF39Q8N4T4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ARHGEF39Q8N4T4 AC007322.1-201ENST00000426983 750 ntBASIC19.8■□□□□ 0.76
ARHGEF39Q8N4T4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.8■□□□□ 0.76
ARHGEF39Q8N4T4 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.8■□□□□ 0.76
ARHGEF39Q8N4T4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.8■□□□□ 0.76
ARHGEF39Q8N4T4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.8■□□□□ 0.76
ARHGEF39Q8N4T4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ARHGEF39Q8N4T4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.8■□□□□ 0.76
ARHGEF39Q8N4T4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF39Q8N4T4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF39Q8N4T4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF39Q8N4T4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF39Q8N4T4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF39Q8N4T4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.79■□□□□ 0.76
ARHGEF39Q8N4T4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.79■□□□□ 0.76
ARHGEF39Q8N4T4 AC091799.1-201ENST00000422823 811 ntBASIC19.79■□□□□ 0.76
ARHGEF39Q8N4T4 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.79■□□□□ 0.76
ARHGEF39Q8N4T4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF39Q8N4T4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.79■□□□□ 0.76
ARHGEF39Q8N4T4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.79■□□□□ 0.76
ARHGEF39Q8N4T4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF39Q8N4T4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF39Q8N4T4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
ARHGEF39Q8N4T4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ARHGEF39Q8N4T4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF39Q8N4T4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF39Q8N4T4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ARHGEF39Q8N4T4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.78■□□□□ 0.76
ARHGEF39Q8N4T4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ARHGEF39Q8N4T4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ARHGEF39Q8N4T4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ARHGEF39Q8N4T4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ARHGEF39Q8N4T4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ARHGEF39Q8N4T4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.78■□□□□ 0.76
ARHGEF39Q8N4T4 MIR663A-201ENST00000385250 93 ntBASIC19.78■□□□□ 0.76
ARHGEF39Q8N4T4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.78■□□□□ 0.76
ARHGEF39Q8N4T4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.78■□□□□ 0.76
ARHGEF39Q8N4T4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.78■□□□□ 0.76
ARHGEF39Q8N4T4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ARHGEF39Q8N4T4 AC005181.1-201ENST00000604782 1256 ntBASIC19.78■□□□□ 0.76
ARHGEF39Q8N4T4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
ARHGEF39Q8N4T4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ARHGEF39Q8N4T4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.78■□□□□ 0.76
ARHGEF39Q8N4T4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
ARHGEF39Q8N4T4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
ARHGEF39Q8N4T4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ARHGEF39Q8N4T4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ARHGEF39Q8N4T4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.77■□□□□ 0.76
ARHGEF39Q8N4T4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
ARHGEF39Q8N4T4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ARHGEF39Q8N4T4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ARHGEF39Q8N4T4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ARHGEF39Q8N4T4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.77■□□□□ 0.76
ARHGEF39Q8N4T4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ARHGEF39Q8N4T4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
ARHGEF39Q8N4T4 NCF1B-203ENST00000435988 1254 ntBASIC19.77■□□□□ 0.76
ARHGEF39Q8N4T4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.77■□□□□ 0.76
ARHGEF39Q8N4T4 AL162412.1-201ENST00000567129 965 ntBASIC19.77■□□□□ 0.76
ARHGEF39Q8N4T4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
ARHGEF39Q8N4T4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.77■□□□□ 0.76
ARHGEF39Q8N4T4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.77■□□□□ 0.76
ARHGEF39Q8N4T4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ARHGEF39Q8N4T4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.77■□□□□ 0.75
ARHGEF39Q8N4T4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
ARHGEF39Q8N4T4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ARHGEF39Q8N4T4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ARHGEF39Q8N4T4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ARHGEF39Q8N4T4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms