Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
VPS8Q8N3P4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
VPS8Q8N3P4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC32.92■■■□□ 2.86
VPS8Q8N3P4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC32.92■■■□□ 2.86
VPS8Q8N3P4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
VPS8Q8N3P4 Z98882.1-201ENST00000622160 2253 ntBASIC32.91■■■□□ 2.86
VPS8Q8N3P4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
VPS8Q8N3P4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC32.91■■■□□ 2.86
VPS8Q8N3P4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
VPS8Q8N3P4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC32.91■■■□□ 2.86
VPS8Q8N3P4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
VPS8Q8N3P4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
VPS8Q8N3P4 GPX1P1-201ENST00000388829 606 ntBASIC32.91■■■□□ 2.86
VPS8Q8N3P4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC32.91■■■□□ 2.86
VPS8Q8N3P4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC32.91■■■□□ 2.86
VPS8Q8N3P4 AC093787.1-201ENST00000450396 207 ntBASIC32.91■■■□□ 2.86
VPS8Q8N3P4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC32.91■■■□□ 2.86
VPS8Q8N3P4 AL109923.1-201ENST00000618799 583 ntBASIC32.91■■■□□ 2.86
VPS8Q8N3P4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC32.91■■■□□ 2.86
VPS8Q8N3P4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
VPS8Q8N3P4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC32.9■■■□□ 2.86
VPS8Q8N3P4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC32.9■■■□□ 2.86
VPS8Q8N3P4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC32.9■■■□□ 2.86
VPS8Q8N3P4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC32.9■■■□□ 2.86
VPS8Q8N3P4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
VPS8Q8N3P4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
VPS8Q8N3P4 AC142086.2-201ENST00000569753 217 ntBASIC32.9■■■□□ 2.86
VPS8Q8N3P4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC32.89■■■□□ 2.86
VPS8Q8N3P4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC32.89■■■□□ 2.86
VPS8Q8N3P4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC32.89■■■□□ 2.86
VPS8Q8N3P4 BID-212ENST00000614949 1988 ntTSL 5 BASIC32.89■■■□□ 2.86
VPS8Q8N3P4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC32.89■■■□□ 2.86
VPS8Q8N3P4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC32.88■■■□□ 2.85
VPS8Q8N3P4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC32.88■■■□□ 2.85
VPS8Q8N3P4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
VPS8Q8N3P4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC32.88■■■□□ 2.85
VPS8Q8N3P4 OR10C1-204ENST00000622521 1039 ntBASIC32.88■■■□□ 2.85
VPS8Q8N3P4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC32.88■■■□□ 2.85
VPS8Q8N3P4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC32.87■■■□□ 2.85
VPS8Q8N3P4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC32.87■■■□□ 2.85
VPS8Q8N3P4 AC098934.4-201ENST00000564127 592 ntBASIC32.87■■■□□ 2.85
VPS8Q8N3P4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC32.87■■■□□ 2.85
VPS8Q8N3P4 AL591742.1-201ENST00000604433 565 ntBASIC32.87■■■□□ 2.85
VPS8Q8N3P4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
VPS8Q8N3P4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC32.87■■■□□ 2.85
VPS8Q8N3P4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
VPS8Q8N3P4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
VPS8Q8N3P4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC32.87■■■□□ 2.85
VPS8Q8N3P4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
VPS8Q8N3P4 RARRES2P4-201ENST00000514074 484 ntBASIC32.86■■■□□ 2.85
VPS8Q8N3P4 AF201337.1-201ENST00000520239 748 ntBASIC32.86■■■□□ 2.85
VPS8Q8N3P4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC32.86■■■□□ 2.85
VPS8Q8N3P4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
VPS8Q8N3P4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
VPS8Q8N3P4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC32.86■■■□□ 2.85
VPS8Q8N3P4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
VPS8Q8N3P4 AC079834.2-201ENST00000609776 1949 ntBASIC32.86■■■□□ 2.85
VPS8Q8N3P4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC32.86■■■□□ 2.85
VPS8Q8N3P4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
VPS8Q8N3P4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC32.85■■■□□ 2.85
VPS8Q8N3P4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC32.85■■■□□ 2.85
VPS8Q8N3P4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC32.85■■■□□ 2.85
VPS8Q8N3P4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC32.85■■■□□ 2.85
VPS8Q8N3P4 AC083906.2-201ENST00000511578 360 ntBASIC32.85■■■□□ 2.85
VPS8Q8N3P4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC32.85■■■□□ 2.85
VPS8Q8N3P4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC32.85■■■□□ 2.85
VPS8Q8N3P4 FAM21FP-204ENST00000608637 956 ntBASIC32.85■■■□□ 2.85
VPS8Q8N3P4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
VPS8Q8N3P4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
VPS8Q8N3P4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC32.85■■■□□ 2.85
VPS8Q8N3P4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC32.85■■■□□ 2.85
VPS8Q8N3P4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC32.85■■■□□ 2.85
VPS8Q8N3P4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC32.85■■■□□ 2.85
VPS8Q8N3P4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
VPS8Q8N3P4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC32.85■■■□□ 2.85
VPS8Q8N3P4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
VPS8Q8N3P4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC32.84■■■□□ 2.85
VPS8Q8N3P4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
VPS8Q8N3P4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
VPS8Q8N3P4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC32.84■■■□□ 2.85
VPS8Q8N3P4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
VPS8Q8N3P4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC32.84■■■□□ 2.85
VPS8Q8N3P4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC32.83■■■□□ 2.85
VPS8Q8N3P4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC32.83■■■□□ 2.85
VPS8Q8N3P4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC32.83■■■□□ 2.85
VPS8Q8N3P4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
VPS8Q8N3P4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
VPS8Q8N3P4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC32.83■■■□□ 2.85
VPS8Q8N3P4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC32.83■■■□□ 2.85
VPS8Q8N3P4 AL355802.2-201ENST00000402069 882 ntBASIC32.83■■■□□ 2.85
VPS8Q8N3P4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC32.83■■■□□ 2.85
VPS8Q8N3P4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC32.83■■■□□ 2.85
VPS8Q8N3P4 AC069236.1-201ENST00000604339 616 ntBASIC32.83■■■□□ 2.85
VPS8Q8N3P4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC32.83■■■□□ 2.85
VPS8Q8N3P4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC32.82■■■□□ 2.85
VPS8Q8N3P4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC32.82■■■□□ 2.84
VPS8Q8N3P4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC32.82■■■□□ 2.84
VPS8Q8N3P4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
VPS8Q8N3P4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
VPS8Q8N3P4 AC105036.2-201ENST00000569468 176 ntBASIC32.82■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms