Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.72■□□□□ 0.91
NUDCD3Q8IVD9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.72■□□□□ 0.91
NUDCD3Q8IVD9 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.72■□□□□ 0.91
NUDCD3Q8IVD9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.72■□□□□ 0.91
NUDCD3Q8IVD9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
NUDCD3Q8IVD9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
NUDCD3Q8IVD9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUDCD3Q8IVD9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.72■□□□□ 0.91
NUDCD3Q8IVD9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUDCD3Q8IVD9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NUDCD3Q8IVD9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUDCD3Q8IVD9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.71■□□□□ 0.91
NUDCD3Q8IVD9 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUDCD3Q8IVD9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUDCD3Q8IVD9 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.71■□□□□ 0.91
NUDCD3Q8IVD9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.71■□□□□ 0.91
NUDCD3Q8IVD9 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NUDCD3Q8IVD9 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.71■□□□□ 0.91
NUDCD3Q8IVD9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NUDCD3Q8IVD9 AP005435.1-201ENST00000529293 1178 ntBASIC20.71■□□□□ 0.91
NUDCD3Q8IVD9 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
NUDCD3Q8IVD9 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.71■□□□□ 0.91
NUDCD3Q8IVD9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.71■□□□□ 0.91
NUDCD3Q8IVD9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUDCD3Q8IVD9 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.71■□□□□ 0.91
NUDCD3Q8IVD9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.71■□□□□ 0.91
NUDCD3Q8IVD9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.71■□□□□ 0.91
NUDCD3Q8IVD9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUDCD3Q8IVD9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUDCD3Q8IVD9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
NUDCD3Q8IVD9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
NUDCD3Q8IVD9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
NUDCD3Q8IVD9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NUDCD3Q8IVD9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
NUDCD3Q8IVD9 AC121338.2-201ENST00000622535 1744 ntBASIC20.7■□□□□ 0.9
NUDCD3Q8IVD9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
NUDCD3Q8IVD9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUDCD3Q8IVD9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NUDCD3Q8IVD9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
NUDCD3Q8IVD9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUDCD3Q8IVD9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.7■□□□□ 0.9
NUDCD3Q8IVD9 MIR3621-201ENST00000580529 85 ntBASIC20.7■□□□□ 0.9
NUDCD3Q8IVD9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NUDCD3Q8IVD9 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUDCD3Q8IVD9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUDCD3Q8IVD9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUDCD3Q8IVD9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUDCD3Q8IVD9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUDCD3Q8IVD9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NUDCD3Q8IVD9 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NUDCD3Q8IVD9 PCDHAC2-203ENST00000615316 3011 ntBASIC20.7■□□□□ 0.9
NUDCD3Q8IVD9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.69■□□□□ 0.9
NUDCD3Q8IVD9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.69■□□□□ 0.9
NUDCD3Q8IVD9 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUDCD3Q8IVD9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
NUDCD3Q8IVD9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.69■□□□□ 0.9
NUDCD3Q8IVD9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
NUDCD3Q8IVD9 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUDCD3Q8IVD9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NUDCD3Q8IVD9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUDCD3Q8IVD9 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUDCD3Q8IVD9 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.69■□□□□ 0.9
NUDCD3Q8IVD9 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.69■□□□□ 0.9
NUDCD3Q8IVD9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.69■□□□□ 0.9
NUDCD3Q8IVD9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.69■□□□□ 0.9
NUDCD3Q8IVD9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
NUDCD3Q8IVD9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUDCD3Q8IVD9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUDCD3Q8IVD9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NUDCD3Q8IVD9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUDCD3Q8IVD9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUDCD3Q8IVD9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.68■□□□□ 0.9
NUDCD3Q8IVD9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.68■□□□□ 0.9
NUDCD3Q8IVD9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUDCD3Q8IVD9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
NUDCD3Q8IVD9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUDCD3Q8IVD9 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUDCD3Q8IVD9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUDCD3Q8IVD9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
NUDCD3Q8IVD9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NUDCD3Q8IVD9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NUDCD3Q8IVD9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NUDCD3Q8IVD9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NUDCD3Q8IVD9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUDCD3Q8IVD9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.68■□□□□ 0.9
NUDCD3Q8IVD9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
NUDCD3Q8IVD9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NUDCD3Q8IVD9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUDCD3Q8IVD9 AC027702.1-201ENST00000563810 1770 ntBASIC20.67■□□□□ 0.9
NUDCD3Q8IVD9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUDCD3Q8IVD9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
NUDCD3Q8IVD9 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.67■□□□□ 0.9
NUDCD3Q8IVD9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.67■□□□□ 0.9
NUDCD3Q8IVD9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
NUDCD3Q8IVD9 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUDCD3Q8IVD9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NUDCD3Q8IVD9 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.67■□□□□ 0.9
NUDCD3Q8IVD9 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NUDCD3Q8IVD9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NUDCD3Q8IVD9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms