Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.36■□□□□ 0.53
LYSMD2Q8IV50 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD2Q8IV50 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD2Q8IV50 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD2Q8IV50 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD2Q8IV50 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.36■□□□□ 0.53
LYSMD2Q8IV50 DUX4L18-201ENST00000553347 1267 ntBASIC18.36■□□□□ 0.53
LYSMD2Q8IV50 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.36■□□□□ 0.53
LYSMD2Q8IV50 PLK5-205ENST00000642079 1969 ntBASIC18.36■□□□□ 0.53
LYSMD2Q8IV50 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD2Q8IV50 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LYSMD2Q8IV50 NEFHP1-201ENST00000412845 2629 ntBASIC18.36■□□□□ 0.53
LYSMD2Q8IV50 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD2Q8IV50 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD2Q8IV50 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD2Q8IV50 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD2Q8IV50 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.35■□□□□ 0.53
LYSMD2Q8IV50 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD2Q8IV50 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.35■□□□□ 0.53
LYSMD2Q8IV50 SNX5-217ENST00000606557 1087 ntBASIC18.35■□□□□ 0.53
LYSMD2Q8IV50 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD2Q8IV50 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.35■□□□□ 0.53
LYSMD2Q8IV50 AC005082.1-201ENST00000413042 2259 ntBASIC18.35■□□□□ 0.53
LYSMD2Q8IV50 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD2Q8IV50 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD2Q8IV50 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD2Q8IV50 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD2Q8IV50 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD2Q8IV50 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
LYSMD2Q8IV50 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD2Q8IV50 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
LYSMD2Q8IV50 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD2Q8IV50 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD2Q8IV50 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD2Q8IV50 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.34■□□□□ 0.53
LYSMD2Q8IV50 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.34■□□□□ 0.53
LYSMD2Q8IV50 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD2Q8IV50 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD2Q8IV50 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LYSMD2Q8IV50 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD2Q8IV50 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.34■□□□□ 0.53
LYSMD2Q8IV50 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD2Q8IV50 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.34■□□□□ 0.53
LYSMD2Q8IV50 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD2Q8IV50 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LYSMD2Q8IV50 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LYSMD2Q8IV50 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LYSMD2Q8IV50 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LYSMD2Q8IV50 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LYSMD2Q8IV50 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LYSMD2Q8IV50 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
LYSMD2Q8IV50 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.33■□□□□ 0.52
LYSMD2Q8IV50 RARRES2P2-201ENST00000394842 485 ntBASIC18.33■□□□□ 0.52
LYSMD2Q8IV50 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.33■□□□□ 0.52
LYSMD2Q8IV50 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.33■□□□□ 0.52
LYSMD2Q8IV50 PVT1_1.1-201ENST00000615125 194 ntBASIC18.33■□□□□ 0.52
LYSMD2Q8IV50 AC009086.3-201ENST00000623486 1008 ntBASIC18.33■□□□□ 0.52
LYSMD2Q8IV50 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LYSMD2Q8IV50 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LYSMD2Q8IV50 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LYSMD2Q8IV50 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LYSMD2Q8IV50 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LYSMD2Q8IV50 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LYSMD2Q8IV50 AC099778.1-201ENST00000568593 1911 ntBASIC18.33■□□□□ 0.52
LYSMD2Q8IV50 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LYSMD2Q8IV50 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
LYSMD2Q8IV50 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LYSMD2Q8IV50 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
LYSMD2Q8IV50 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
LYSMD2Q8IV50 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD2Q8IV50 AL512408.1-201ENST00000569378 2000 ntBASIC18.32■□□□□ 0.52
LYSMD2Q8IV50 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD2Q8IV50 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.32■□□□□ 0.52
LYSMD2Q8IV50 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.32■□□□□ 0.52
LYSMD2Q8IV50 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD2Q8IV50 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.32■□□□□ 0.52
LYSMD2Q8IV50 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.32■□□□□ 0.52
LYSMD2Q8IV50 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD2Q8IV50 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.32■□□□□ 0.52
LYSMD2Q8IV50 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD2Q8IV50 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD2Q8IV50 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD2Q8IV50 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD2Q8IV50 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD2Q8IV50 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LYSMD2Q8IV50 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LYSMD2Q8IV50 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
LYSMD2Q8IV50 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LYSMD2Q8IV50 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
LYSMD2Q8IV50 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LYSMD2Q8IV50 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.31■□□□□ 0.52
LYSMD2Q8IV50 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LYSMD2Q8IV50 DUX4L4-201ENST00000566884 1269 ntBASIC18.31■□□□□ 0.52
LYSMD2Q8IV50 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.31■□□□□ 0.52
LYSMD2Q8IV50 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LYSMD2Q8IV50 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LYSMD2Q8IV50 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
LYSMD2Q8IV50 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LYSMD2Q8IV50 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LYSMD2Q8IV50 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms