Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MRPL55Q7Z7F7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
MRPL55Q7Z7F7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MRPL55Q7Z7F7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
MRPL55Q7Z7F7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
MRPL55Q7Z7F7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
MRPL55Q7Z7F7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 AC009237.3-201ENST00000393279 1427 ntBASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 AC096631.2-201ENST00000436136 790 ntBASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 PBX2P1-201ENST00000493219 1291 ntBASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL55Q7Z7F7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
MRPL55Q7Z7F7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
MRPL55Q7Z7F7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC13.38□□□□□ -0.27
MRPL55Q7Z7F7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
MRPL55Q7Z7F7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
MRPL55Q7Z7F7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MRPL55Q7Z7F7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
MRPL55Q7Z7F7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
MRPL55Q7Z7F7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
MRPL55Q7Z7F7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MRPL55Q7Z7F7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MRPL55Q7Z7F7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC13.38□□□□□ -0.27
MRPL55Q7Z7F7 AC099791.1-201ENST00000416440 715 ntBASIC13.38□□□□□ -0.27
MRPL55Q7Z7F7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC13.38□□□□□ -0.27
MRPL55Q7Z7F7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC13.38□□□□□ -0.27
MRPL55Q7Z7F7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
MRPL55Q7Z7F7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC13.38□□□□□ -0.27
MRPL55Q7Z7F7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
MRPL55Q7Z7F7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
MRPL55Q7Z7F7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
MRPL55Q7Z7F7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC13.38□□□□□ -0.27
MRPL55Q7Z7F7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MRPL55Q7Z7F7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC13.38□□□□□ -0.27
MRPL55Q7Z7F7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MRPL55Q7Z7F7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MRPL55Q7Z7F7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL55Q7Z7F7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL55Q7Z7F7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL55Q7Z7F7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL55Q7Z7F7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL55Q7Z7F7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL55Q7Z7F7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL55Q7Z7F7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC13.37□□□□□ -0.27
MRPL55Q7Z7F7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
MRPL55Q7Z7F7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL55Q7Z7F7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
MRPL55Q7Z7F7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL55Q7Z7F7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL55Q7Z7F7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC13.37□□□□□ -0.27
MRPL55Q7Z7F7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL55Q7Z7F7 GRAMD4P4-201ENST00000613563 1115 ntBASIC13.37□□□□□ -0.27
MRPL55Q7Z7F7 AC106739.1-201ENST00000617035 715 ntBASIC13.37□□□□□ -0.27
MRPL55Q7Z7F7 AC105233.4-201ENST00000642045 216 ntBASIC13.37□□□□□ -0.27
MRPL55Q7Z7F7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
MRPL55Q7Z7F7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL55Q7Z7F7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL55Q7Z7F7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL55Q7Z7F7 TSPY26P-201ENST00000476365 1326 ntBASIC13.37□□□□□ -0.27
MRPL55Q7Z7F7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL55Q7Z7F7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL55Q7Z7F7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
MRPL55Q7Z7F7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
MRPL55Q7Z7F7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
MRPL55Q7Z7F7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms