Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 PLK5-205ENST00000642079 1969 ntBASIC20.97■□□□□ 0.95
CDHR3Q6ZTQ4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CDHR3Q6ZTQ4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.97■□□□□ 0.95
CDHR3Q6ZTQ4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDHR3Q6ZTQ4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDHR3Q6ZTQ4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDHR3Q6ZTQ4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.96■□□□□ 0.95
CDHR3Q6ZTQ4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDHR3Q6ZTQ4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDHR3Q6ZTQ4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDHR3Q6ZTQ4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDHR3Q6ZTQ4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDHR3Q6ZTQ4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.96■□□□□ 0.95
CDHR3Q6ZTQ4 AL354811.1-201ENST00000610286 706 ntBASIC20.96■□□□□ 0.95
CDHR3Q6ZTQ4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CDHR3Q6ZTQ4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
CDHR3Q6ZTQ4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
CDHR3Q6ZTQ4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDHR3Q6ZTQ4 AC073314.1-201ENST00000568729 2216 ntBASIC20.96■□□□□ 0.95
CDHR3Q6ZTQ4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CDHR3Q6ZTQ4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CDHR3Q6ZTQ4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.96■□□□□ 0.95
CDHR3Q6ZTQ4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDHR3Q6ZTQ4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDHR3Q6ZTQ4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
CDHR3Q6ZTQ4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
CDHR3Q6ZTQ4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CDHR3Q6ZTQ4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CDHR3Q6ZTQ4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.95■□□□□ 0.94
CDHR3Q6ZTQ4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.95■□□□□ 0.94
CDHR3Q6ZTQ4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.95■□□□□ 0.94
CDHR3Q6ZTQ4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDHR3Q6ZTQ4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDHR3Q6ZTQ4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.95■□□□□ 0.94
CDHR3Q6ZTQ4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.94■□□□□ 0.94
CDHR3Q6ZTQ4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDHR3Q6ZTQ4 AP006587.3-201ENST00000525742 1516 ntBASIC20.94■□□□□ 0.94
CDHR3Q6ZTQ4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDHR3Q6ZTQ4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDHR3Q6ZTQ4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDHR3Q6ZTQ4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.94■□□□□ 0.94
CDHR3Q6ZTQ4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.94■□□□□ 0.94
CDHR3Q6ZTQ4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.94■□□□□ 0.94
CDHR3Q6ZTQ4 AC105233.4-201ENST00000642045 216 ntBASIC20.94■□□□□ 0.94
CDHR3Q6ZTQ4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CDHR3Q6ZTQ4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CDHR3Q6ZTQ4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CDHR3Q6ZTQ4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDHR3Q6ZTQ4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.94■□□□□ 0.94
CDHR3Q6ZTQ4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDHR3Q6ZTQ4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.93■□□□□ 0.94
CDHR3Q6ZTQ4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDHR3Q6ZTQ4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.93■□□□□ 0.94
CDHR3Q6ZTQ4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.93■□□□□ 0.94
CDHR3Q6ZTQ4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDHR3Q6ZTQ4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.93■□□□□ 0.94
CDHR3Q6ZTQ4 AC027612.3-201ENST00000413684 1047 ntBASIC20.93■□□□□ 0.94
CDHR3Q6ZTQ4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDHR3Q6ZTQ4 YBX1P1-201ENST00000445822 960 ntBASIC20.93■□□□□ 0.94
CDHR3Q6ZTQ4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.93■□□□□ 0.94
CDHR3Q6ZTQ4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDHR3Q6ZTQ4 AP005212.1-201ENST00000581547 1997 ntBASIC20.93■□□□□ 0.94
CDHR3Q6ZTQ4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDHR3Q6ZTQ4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDHR3Q6ZTQ4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.93■□□□□ 0.94
CDHR3Q6ZTQ4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDHR3Q6ZTQ4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDHR3Q6ZTQ4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDHR3Q6ZTQ4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDHR3Q6ZTQ4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDHR3Q6ZTQ4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDHR3Q6ZTQ4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
CDHR3Q6ZTQ4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDHR3Q6ZTQ4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDHR3Q6ZTQ4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDHR3Q6ZTQ4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDHR3Q6ZTQ4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.92■□□□□ 0.94
CDHR3Q6ZTQ4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.92■□□□□ 0.94
CDHR3Q6ZTQ4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.92■□□□□ 0.94
CDHR3Q6ZTQ4 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.92■□□□□ 0.94
CDHR3Q6ZTQ4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDHR3Q6ZTQ4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.92■□□□□ 0.94
CDHR3Q6ZTQ4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDHR3Q6ZTQ4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDHR3Q6ZTQ4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CDHR3Q6ZTQ4 AC006128.1-201ENST00000624704 1661 ntBASIC20.92■□□□□ 0.94
CDHR3Q6ZTQ4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDHR3Q6ZTQ4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDHR3Q6ZTQ4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDHR3Q6ZTQ4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDHR3Q6ZTQ4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDHR3Q6ZTQ4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CDHR3Q6ZTQ4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDHR3Q6ZTQ4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDHR3Q6ZTQ4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDHR3Q6ZTQ4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDHR3Q6ZTQ4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.91■□□□□ 0.94
CDHR3Q6ZTQ4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDHR3Q6ZTQ4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.91■□□□□ 0.94
CDHR3Q6ZTQ4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms