Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NIPAL3Q6P499 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NIPAL3Q6P499 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NIPAL3Q6P499 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NIPAL3Q6P499 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
NIPAL3Q6P499 AC027612.3-201ENST00000413684 1047 ntBASIC18.99■□□□□ 0.63
NIPAL3Q6P499 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
NIPAL3Q6P499 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.99■□□□□ 0.63
NIPAL3Q6P499 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NIPAL3Q6P499 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NIPAL3Q6P499 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NIPAL3Q6P499 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.99■□□□□ 0.63
NIPAL3Q6P499 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NIPAL3Q6P499 AP006587.3-201ENST00000525742 1516 ntBASIC18.99■□□□□ 0.63
NIPAL3Q6P499 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NIPAL3Q6P499 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.99■□□□□ 0.63
NIPAL3Q6P499 AC005224.4-201ENST00000583262 1652 ntBASIC18.98■□□□□ 0.63
NIPAL3Q6P499 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NIPAL3Q6P499 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NIPAL3Q6P499 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NIPAL3Q6P499 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.98■□□□□ 0.63
NIPAL3Q6P499 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.98■□□□□ 0.63
NIPAL3Q6P499 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
NIPAL3Q6P499 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.98■□□□□ 0.63
NIPAL3Q6P499 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.98■□□□□ 0.63
NIPAL3Q6P499 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NIPAL3Q6P499 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NIPAL3Q6P499 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
NIPAL3Q6P499 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NIPAL3Q6P499 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NIPAL3Q6P499 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NIPAL3Q6P499 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NIPAL3Q6P499 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
NIPAL3Q6P499 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NIPAL3Q6P499 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
NIPAL3Q6P499 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NIPAL3Q6P499 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NIPAL3Q6P499 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NIPAL3Q6P499 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.97■□□□□ 0.63
NIPAL3Q6P499 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NIPAL3Q6P499 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.97■□□□□ 0.63
NIPAL3Q6P499 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NIPAL3Q6P499 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.97■□□□□ 0.63
NIPAL3Q6P499 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NIPAL3Q6P499 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NIPAL3Q6P499 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NIPAL3Q6P499 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.97■□□□□ 0.63
NIPAL3Q6P499 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.97■□□□□ 0.63
NIPAL3Q6P499 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.97■□□□□ 0.63
NIPAL3Q6P499 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.97■□□□□ 0.63
NIPAL3Q6P499 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NIPAL3Q6P499 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NIPAL3Q6P499 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NIPAL3Q6P499 LINC01006-201ENST00000333319 2292 ntBASIC18.97■□□□□ 0.63
NIPAL3Q6P499 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NIPAL3Q6P499 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NIPAL3Q6P499 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
NIPAL3Q6P499 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NIPAL3Q6P499 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NIPAL3Q6P499 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NIPAL3Q6P499 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.96■□□□□ 0.63
NIPAL3Q6P499 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NIPAL3Q6P499 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.96■□□□□ 0.63
NIPAL3Q6P499 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NIPAL3Q6P499 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
NIPAL3Q6P499 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
NIPAL3Q6P499 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.96■□□□□ 0.63
NIPAL3Q6P499 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NIPAL3Q6P499 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.96■□□□□ 0.63
NIPAL3Q6P499 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NIPAL3Q6P499 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
NIPAL3Q6P499 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NIPAL3Q6P499 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NIPAL3Q6P499 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NIPAL3Q6P499 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NIPAL3Q6P499 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NIPAL3Q6P499 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
NIPAL3Q6P499 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NIPAL3Q6P499 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NIPAL3Q6P499 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NIPAL3Q6P499 TPRG1LP1-201ENST00000598702 760 ntBASIC18.95■□□□□ 0.62
NIPAL3Q6P499 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.95■□□□□ 0.62
NIPAL3Q6P499 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.95■□□□□ 0.62
NIPAL3Q6P499 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NIPAL3Q6P499 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NIPAL3Q6P499 FEM1AP1-201ENST00000431297 1995 ntBASIC18.95■□□□□ 0.62
NIPAL3Q6P499 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NIPAL3Q6P499 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NIPAL3Q6P499 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.95■□□□□ 0.62
NIPAL3Q6P499 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NIPAL3Q6P499 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NIPAL3Q6P499 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NIPAL3Q6P499 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.94■□□□□ 0.62
NIPAL3Q6P499 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NIPAL3Q6P499 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.94■□□□□ 0.62
NIPAL3Q6P499 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.94■□□□□ 0.62
NIPAL3Q6P499 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
NIPAL3Q6P499 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
NIPAL3Q6P499 YBX1P1-201ENST00000445822 960 ntBASIC18.94■□□□□ 0.62
NIPAL3Q6P499 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms