Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VPS13DQ5THJ4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.21□□□□□ -0.14
VPS13DQ5THJ4 MIR1224-201ENST00000408193 85 ntBASIC14.21□□□□□ -0.14
VPS13DQ5THJ4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
VPS13DQ5THJ4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.21□□□□□ -0.14
VPS13DQ5THJ4 AC243732.1-201ENST00000612648 864 ntBASIC14.21□□□□□ -0.14
VPS13DQ5THJ4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
VPS13DQ5THJ4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
VPS13DQ5THJ4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
VPS13DQ5THJ4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VPS13DQ5THJ4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
VPS13DQ5THJ4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VPS13DQ5THJ4 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS13DQ5THJ4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC14.2□□□□□ -0.14
VPS13DQ5THJ4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VPS13DQ5THJ4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS13DQ5THJ4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS13DQ5THJ4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS13DQ5THJ4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
VPS13DQ5THJ4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC14.2□□□□□ -0.14
VPS13DQ5THJ4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS13DQ5THJ4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.2□□□□□ -0.14
VPS13DQ5THJ4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.2□□□□□ -0.14
VPS13DQ5THJ4 AC069544.1-201ENST00000609399 999 ntBASIC14.2□□□□□ -0.14
VPS13DQ5THJ4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
VPS13DQ5THJ4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VPS13DQ5THJ4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS13DQ5THJ4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS13DQ5THJ4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
VPS13DQ5THJ4 MTDHP1-201ENST00000605323 784 ntBASIC14.2□□□□□ -0.14
VPS13DQ5THJ4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.2□□□□□ -0.14
VPS13DQ5THJ4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC14.2□□□□□ -0.14
VPS13DQ5THJ4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC14.2□□□□□ -0.14
VPS13DQ5THJ4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS13DQ5THJ4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC14.2□□□□□ -0.14
VPS13DQ5THJ4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC14.19□□□□□ -0.14
VPS13DQ5THJ4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
VPS13DQ5THJ4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
VPS13DQ5THJ4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13DQ5THJ4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13DQ5THJ4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13DQ5THJ4 LINC01023-201ENST00000606054 436 ntBASIC14.19□□□□□ -0.14
VPS13DQ5THJ4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC14.19□□□□□ -0.14
VPS13DQ5THJ4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
VPS13DQ5THJ4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13DQ5THJ4 AC010542.4-201ENST00000563151 1910 ntBASIC14.19□□□□□ -0.14
VPS13DQ5THJ4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC14.19□□□□□ -0.14
VPS13DQ5THJ4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC14.19□□□□□ -0.14
VPS13DQ5THJ4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13DQ5THJ4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14.19□□□□□ -0.14
VPS13DQ5THJ4 AC068473.5-201ENST00000616428 2072 ntBASIC14.19□□□□□ -0.14
VPS13DQ5THJ4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
VPS13DQ5THJ4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13DQ5THJ4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.19□□□□□ -0.14
VPS13DQ5THJ4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.19□□□□□ -0.14
VPS13DQ5THJ4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS13DQ5THJ4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS13DQ5THJ4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS13DQ5THJ4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS13DQ5THJ4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VPS13DQ5THJ4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.18□□□□□ -0.14
VPS13DQ5THJ4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
VPS13DQ5THJ4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS13DQ5THJ4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS13DQ5THJ4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VPS13DQ5THJ4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
VPS13DQ5THJ4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC14.18□□□□□ -0.14
VPS13DQ5THJ4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS13DQ5THJ4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS13DQ5THJ4 AC091799.1-201ENST00000422823 811 ntBASIC14.18□□□□□ -0.14
VPS13DQ5THJ4 ABHD17AP6-201ENST00000458502 1044 ntBASIC14.18□□□□□ -0.14
VPS13DQ5THJ4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.18□□□□□ -0.14
VPS13DQ5THJ4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC14.18□□□□□ -0.14
VPS13DQ5THJ4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC14.18□□□□□ -0.14
VPS13DQ5THJ4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS13DQ5THJ4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC14.18□□□□□ -0.14
VPS13DQ5THJ4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS13DQ5THJ4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC14.18□□□□□ -0.14
VPS13DQ5THJ4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS13DQ5THJ4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VPS13DQ5THJ4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14.18□□□□□ -0.14
VPS13DQ5THJ4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.18□□□□□ -0.14
VPS13DQ5THJ4 AC060766.5-201ENST00000590539 871 ntBASIC14.18□□□□□ -0.14
VPS13DQ5THJ4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
VPS13DQ5THJ4 AC120498.10-201ENST00000621827 505 ntBASIC14.18□□□□□ -0.14
VPS13DQ5THJ4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13DQ5THJ4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13DQ5THJ4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13DQ5THJ4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13DQ5THJ4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13DQ5THJ4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13DQ5THJ4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.17□□□□□ -0.14
VPS13DQ5THJ4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13DQ5THJ4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13DQ5THJ4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VPS13DQ5THJ4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC14.17□□□□□ -0.14
VPS13DQ5THJ4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13DQ5THJ4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13DQ5THJ4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
VPS13DQ5THJ4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms