Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTSL3PQ5NE16 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTSL3PQ5NE16 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTSL3PQ5NE16 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTSL3PQ5NE16 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.63■□□□□ 0.89
CTSL3PQ5NE16 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTSL3PQ5NE16 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CTSL3PQ5NE16 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTSL3PQ5NE16 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTSL3PQ5NE16 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTSL3PQ5NE16 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTSL3PQ5NE16 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CTSL3PQ5NE16 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CTSL3PQ5NE16 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CTSL3PQ5NE16 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTSL3PQ5NE16 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CTSL3PQ5NE16 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.62■□□□□ 0.89
CTSL3PQ5NE16 SLC7A5P2-201ENST00000553010 536 ntBASIC20.62■□□□□ 0.89
CTSL3PQ5NE16 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CTSL3PQ5NE16 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CTSL3PQ5NE16 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.62■□□□□ 0.89
CTSL3PQ5NE16 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTSL3PQ5NE16 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTSL3PQ5NE16 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTSL3PQ5NE16 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTSL3PQ5NE16 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTSL3PQ5NE16 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTSL3PQ5NE16 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTSL3PQ5NE16 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTSL3PQ5NE16 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.61■□□□□ 0.89
CTSL3PQ5NE16 AC026271.2-201ENST00000428091 497 ntBASIC20.61■□□□□ 0.89
CTSL3PQ5NE16 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.61■□□□□ 0.89
CTSL3PQ5NE16 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.61■□□□□ 0.89
CTSL3PQ5NE16 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.61■□□□□ 0.89
CTSL3PQ5NE16 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTSL3PQ5NE16 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CTSL3PQ5NE16 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CTSL3PQ5NE16 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.6■□□□□ 0.89
CTSL3PQ5NE16 AC034268.1-201ENST00000441047 882 ntBASIC20.6■□□□□ 0.89
CTSL3PQ5NE16 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.6■□□□□ 0.89
CTSL3PQ5NE16 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CTSL3PQ5NE16 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTSL3PQ5NE16 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CTSL3PQ5NE16 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.6■□□□□ 0.89
CTSL3PQ5NE16 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.6■□□□□ 0.89
CTSL3PQ5NE16 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.6■□□□□ 0.89
CTSL3PQ5NE16 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CTSL3PQ5NE16 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTSL3PQ5NE16 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTSL3PQ5NE16 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.59■□□□□ 0.89
CTSL3PQ5NE16 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CTSL3PQ5NE16 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTSL3PQ5NE16 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTSL3PQ5NE16 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTSL3PQ5NE16 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.59■□□□□ 0.89
CTSL3PQ5NE16 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTSL3PQ5NE16 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTSL3PQ5NE16 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTSL3PQ5NE16 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTSL3PQ5NE16 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTSL3PQ5NE16 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTSL3PQ5NE16 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTSL3PQ5NE16 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTSL3PQ5NE16 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CTSL3PQ5NE16 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CTSL3PQ5NE16 RARRES2P6-201ENST00000567333 442 ntBASIC20.59■□□□□ 0.89
CTSL3PQ5NE16 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.59■□□□□ 0.89
CTSL3PQ5NE16 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTSL3PQ5NE16 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTSL3PQ5NE16 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTSL3PQ5NE16 KRT16P2-201ENST00000414673 1423 ntBASIC20.59■□□□□ 0.89
CTSL3PQ5NE16 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTSL3PQ5NE16 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CTSL3PQ5NE16 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CTSL3PQ5NE16 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CTSL3PQ5NE16 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CTSL3PQ5NE16 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTSL3PQ5NE16 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CTSL3PQ5NE16 PLK5-205ENST00000642079 1969 ntBASIC20.58■□□□□ 0.89
CTSL3PQ5NE16 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.58■□□□□ 0.89
CTSL3PQ5NE16 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.58■□□□□ 0.89
CTSL3PQ5NE16 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CTSL3PQ5NE16 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.58■□□□□ 0.89
CTSL3PQ5NE16 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.58■□□□□ 0.89
CTSL3PQ5NE16 RARRES2P11-201ENST00000635158 484 ntBASIC20.58■□□□□ 0.89
CTSL3PQ5NE16 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTSL3PQ5NE16 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTSL3PQ5NE16 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CTSL3PQ5NE16 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTSL3PQ5NE16 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
CTSL3PQ5NE16 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTSL3PQ5NE16 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTSL3PQ5NE16 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.57■□□□□ 0.88
CTSL3PQ5NE16 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CTSL3PQ5NE16 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTSL3PQ5NE16 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CTSL3PQ5NE16 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTSL3PQ5NE16 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
CTSL3PQ5NE16 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CTSL3PQ5NE16 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms