Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.79■■□□□ 1.08
ATP13A4Q4VNC1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.79■■□□□ 1.08
ATP13A4Q4VNC1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATP13A4Q4VNC1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.79■■□□□ 1.08
ATP13A4Q4VNC1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATP13A4Q4VNC1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATP13A4Q4VNC1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP13A4Q4VNC1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.79■■□□□ 1.08
ATP13A4Q4VNC1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP13A4Q4VNC1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATP13A4Q4VNC1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATP13A4Q4VNC1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.79■■□□□ 1.08
ATP13A4Q4VNC1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATP13A4Q4VNC1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP13A4Q4VNC1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.78■■□□□ 1.08
ATP13A4Q4VNC1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATP13A4Q4VNC1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP13A4Q4VNC1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
ATP13A4Q4VNC1 AC079140.4-201ENST00000507448 529 ntBASIC21.78■■□□□ 1.08
ATP13A4Q4VNC1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP13A4Q4VNC1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP13A4Q4VNC1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.78■■□□□ 1.08
ATP13A4Q4VNC1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.78■■□□□ 1.08
ATP13A4Q4VNC1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATP13A4Q4VNC1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATP13A4Q4VNC1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATP13A4Q4VNC1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP13A4Q4VNC1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP13A4Q4VNC1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
ATP13A4Q4VNC1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.77■■□□□ 1.08
ATP13A4Q4VNC1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP13A4Q4VNC1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP13A4Q4VNC1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
ATP13A4Q4VNC1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ATP13A4Q4VNC1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
ATP13A4Q4VNC1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP13A4Q4VNC1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP13A4Q4VNC1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.77■■□□□ 1.07
ATP13A4Q4VNC1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
ATP13A4Q4VNC1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
ATP13A4Q4VNC1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP13A4Q4VNC1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP13A4Q4VNC1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATP13A4Q4VNC1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATP13A4Q4VNC1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATP13A4Q4VNC1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATP13A4Q4VNC1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATP13A4Q4VNC1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.76■■□□□ 1.07
ATP13A4Q4VNC1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.76■■□□□ 1.07
ATP13A4Q4VNC1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.76■■□□□ 1.07
ATP13A4Q4VNC1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP13A4Q4VNC1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP13A4Q4VNC1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
ATP13A4Q4VNC1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
ATP13A4Q4VNC1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATP13A4Q4VNC1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
ATP13A4Q4VNC1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATP13A4Q4VNC1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP13A4Q4VNC1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.75■■□□□ 1.07
ATP13A4Q4VNC1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP13A4Q4VNC1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.75■■□□□ 1.07
ATP13A4Q4VNC1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP13A4Q4VNC1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
ATP13A4Q4VNC1 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.75■■□□□ 1.07
ATP13A4Q4VNC1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.75■■□□□ 1.07
ATP13A4Q4VNC1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
ATP13A4Q4VNC1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.75■■□□□ 1.07
ATP13A4Q4VNC1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP13A4Q4VNC1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.75■■□□□ 1.07
ATP13A4Q4VNC1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP13A4Q4VNC1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP13A4Q4VNC1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.74■■□□□ 1.07
ATP13A4Q4VNC1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
ATP13A4Q4VNC1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP13A4Q4VNC1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
ATP13A4Q4VNC1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP13A4Q4VNC1 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.74■■□□□ 1.07
ATP13A4Q4VNC1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.74■■□□□ 1.07
ATP13A4Q4VNC1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.74■■□□□ 1.07
ATP13A4Q4VNC1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP13A4Q4VNC1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.74■■□□□ 1.07
ATP13A4Q4VNC1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP13A4Q4VNC1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP13A4Q4VNC1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP13A4Q4VNC1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.74■■□□□ 1.07
ATP13A4Q4VNC1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP13A4Q4VNC1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP13A4Q4VNC1 KRT87P-202ENST00000534226 1464 ntBASIC21.73■■□□□ 1.07
ATP13A4Q4VNC1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP13A4Q4VNC1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.73■■□□□ 1.07
ATP13A4Q4VNC1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.73■■□□□ 1.07
ATP13A4Q4VNC1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.73■■□□□ 1.07
ATP13A4Q4VNC1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
ATP13A4Q4VNC1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATP13A4Q4VNC1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
ATP13A4Q4VNC1 LINC02228-203ENST00000641970 1355 ntBASIC21.73■■□□□ 1.07
ATP13A4Q4VNC1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
ATP13A4Q4VNC1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.72■■□□□ 1.07
ATP13A4Q4VNC1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
ATP13A4Q4VNC1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms