Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 USO1YDL058W 5373 nt2.11□□□□□ -2.07
RKR1Q04781 RSM25YIL093C 795 nt2.1□□□□□ -2.07
RKR1Q04781 YRB30YGL164C 1323 nt2.1□□□□□ -2.07
RKR1Q04781 MRE11YMR224C 2079 nt2.1□□□□□ -2.07
RKR1Q04781 MRPL9YGR220C 810 nt2.1□□□□□ -2.07
RKR1Q04781 YGR242WYGR242W 309 nt2.1□□□□□ -2.07
RKR1Q04781 CYC1YJR048W 330 nt2.1□□□□□ -2.07
RKR1Q04781 YKL165C-AYKL165C-A 234 nt2.1□□□□□ -2.07
RKR1Q04781 YLR419WYLR419W 4308 nt2.1□□□□□ -2.07
RKR1Q04781 REC102YLR329W 795 nt2.09□□□□□ -2.08
RKR1Q04781 ERG29YMR134W 714 nt2.09□□□□□ -2.08
RKR1Q04781 COQ9YLR201C 783 nt2.08□□□□□ -2.08
RKR1Q04781 RPB11YOL005C 363 nt2.08□□□□□ -2.08
RKR1Q04781 APM1YPL259C 1428 nt2.08□□□□□ -2.08
RKR1Q04781 FIN1YDR130C 876 nt2.07□□□□□ -2.08
RKR1Q04781 YPR027CYPR027C 834 nt2.07□□□□□ -2.08
RKR1Q04781 ORC4YPR162C 1590 nt2.07□□□□□ -2.08
RKR1Q04781 MSM1YGR171C 1728 nt2.07□□□□□ -2.08
RKR1Q04781 AEP2YMR282C 1743 nt2.07□□□□□ -2.08
RKR1Q04781 UTP5YDR398W 1932 nt2.07□□□□□ -2.08
RKR1Q04781 YDL199CYDL199C 2064 nt2.07□□□□□ -2.08
RKR1Q04781 GEA2YEL022W 4380 nt2.07□□□□□ -2.08
RKR1Q04781 POL5YEL055C 3069 nt2.07□□□□□ -2.08
RKR1Q04781 YDR169C-AYDR169C-A 150 nt2.06□□□□□ -2.08
RKR1Q04781 MSL1YIR009W 336 nt2.06□□□□□ -2.08
RKR1Q04781 RIC1YLR039C 3171 nt2.06□□□□□ -2.08
RKR1Q04781 PSY3YLR376C 729 nt2.06□□□□□ -2.08
RKR1Q04781 FOL3YMR113W 1284 nt2.06□□□□□ -2.08
RKR1Q04781 YJR061WYJR061W 2808 nt2.06□□□□□ -2.08
RKR1Q04781 LHS1YKL073W 2646 nt2.06□□□□□ -2.08
RKR1Q04781 PET100YDR079W 336 nt2.06□□□□□ -2.08
RKR1Q04781 OCT1YKL134C 2319 nt2.06□□□□□ -2.08
RKR1Q04781 NPL4YBR170C 1743 nt2.05□□□□□ -2.08
RKR1Q04781 SCL1YGL011C 759 nt2.05□□□□□ -2.08
RKR1Q04781 SPC98YNL126W 2541 nt2.05□□□□□ -2.08
RKR1Q04781 SMY2YBR172C 2223 nt2.04□□□□□ -2.08
RKR1Q04781 SNM1YDR478W 597 nt2.04□□□□□ -2.08
RKR1Q04781 PPE1YHR075C 1203 nt2.04□□□□□ -2.08
RKR1Q04781 YIR014WYIR014W 729 nt2.04□□□□□ -2.08
RKR1Q04781 CRS5YOR031W 210 nt2.04□□□□□ -2.08
RKR1Q04781 YCK3YER123W 1575 nt2.04□□□□□ -2.08
RKR1Q04781 SRD1YCR018C 666 nt2.03□□□□□ -2.08
RKR1Q04781 TMA16YOR252W 537 nt2.03□□□□□ -2.08
RKR1Q04781 REV1YOR346W 2958 nt2.03□□□□□ -2.08
RKR1Q04781 GRX1YCL035C 333 nt2.02□□□□□ -2.09
RKR1Q04781 IPT1YDR072C 1584 nt2.02□□□□□ -2.09
RKR1Q04781 MYO2YOR326W 4725 nt2.02□□□□□ -2.09
RKR1Q04781 MTR2YKL186C 555 nt2.02□□□□□ -2.09
RKR1Q04781 SEN15YMR059W 387 nt2.02□□□□□ -2.09
RKR1Q04781 HPA2YPR193C 471 nt2.02□□□□□ -2.09
RKR1Q04781 YDR261W-BYDR261W-B 5313 nt2.01□□□□□ -2.09
RKR1Q04781 YJR003CYJR003C 1560 nt2.01□□□□□ -2.09
RKR1Q04781 UBX3YDL091C 1368 nt2.01□□□□□ -2.09
RKR1Q04781 SLM1YIL105C 2061 nt2.01□□□□□ -2.09
RKR1Q04781 YDL073WYDL073W 2955 nt2.01□□□□□ -2.09
RKR1Q04781 PIS1YPR113W 663 nt2.01□□□□□ -2.09
RKR1Q04781 snR37snR37 386 nt2.01□□□□□ -2.09
RKR1Q04781 ORC2YBR060C 1863 nt2□□□□□ -2.09
RKR1Q04781 URB2YJR041C 3525 nt2□□□□□ -2.09
RKR1Q04781 UBC6YER100W 753 nt2□□□□□ -2.09
RKR1Q04781 PRP38YGR075C 729 nt2□□□□□ -2.09
RKR1Q04781 tQ(UUG)E2tQ(UUG)E2 72 nt2□□□□□ -2.09
RKR1Q04781 MRPL33YMR286W 261 nt2□□□□□ -2.09
RKR1Q04781 CPR8YNR028W 927 nt2□□□□□ -2.09
RKR1Q04781 MET18YIL128W 3099 nt2□□□□□ -2.09
RKR1Q04781 PUF2YPR042C 3228 nt1.99□□□□□ -2.09
RKR1Q04781 SLX8YER116C 825 nt1.99□□□□□ -2.09
RKR1Q04781 RRF1YHR038W 693 nt1.99□□□□□ -2.09
RKR1Q04781 SHE2YKL130C 741 nt1.99□□□□□ -2.09
RKR1Q04781 NRG2YBR066C 663 nt1.99□□□□□ -2.09
RKR1Q04781 CYC2YOR037W 1101 nt1.98□□□□□ -2.09
RKR1Q04781 HOP1YIL072W 1818 nt1.98□□□□□ -2.09
RKR1Q04781 PMD1YER132C 5262 nt1.98□□□□□ -2.09
RKR1Q04781 MAC1YMR021C 1254 nt1.98□□□□□ -2.09
RKR1Q04781 YPR097WYPR097W 3222 nt1.97□□□□□ -2.09
RKR1Q04781 YEL1YBL060W 2064 nt1.97□□□□□ -2.09
RKR1Q04781 YCK2YNL154C 1641 nt1.97□□□□□ -2.09
RKR1Q04781 ERP3YDL018C 678 nt1.97□□□□□ -2.09
RKR1Q04781 FIG2YCR089W 4830 nt1.96□□□□□ -2.1
RKR1Q04781 LDB17YDL146W 1476 nt1.96□□□□□ -2.1
RKR1Q04781 YDR210W-BYDR210W-B 5313 nt1.95□□□□□ -2.1
RKR1Q04781 CTP1YBR291C 900 nt1.95□□□□□ -2.1
RKR1Q04781 YKU80YMR106C 1890 nt1.95□□□□□ -2.1
RKR1Q04781 ELG1YOR144C 2376 nt1.95□□□□□ -2.1
RKR1Q04781 BIR1YJR089W 2865 nt1.95□□□□□ -2.1
RKR1Q04781 DDI2YFL061W 678 nt1.94□□□□□ -2.1
RKR1Q04781 YHR180W-AYHR180W-A 183 nt1.94□□□□□ -2.1
RKR1Q04781 EST3YIL009C-A 546 nt1.94□□□□□ -2.1
RKR1Q04781 YIL156W-AYIL156W-A 402 nt1.94□□□□□ -2.1
RKR1Q04781 ZRG17YNR039C 1818 nt1.94□□□□□ -2.1
RKR1Q04781 RLF2YPR018W 1821 nt1.94□□□□□ -2.1
RKR1Q04781 MSN4YKL062W 1893 nt1.94□□□□□ -2.1
RKR1Q04781 SIP4YJL089W 2490 nt1.94□□□□□ -2.1
RKR1Q04781 HTD2YHR067W 843 nt1.93□□□□□ -2.1
RKR1Q04781 MRPL27YBR282W 441 nt1.93□□□□□ -2.1
RKR1Q04781 YGR109W-BYGR109W-B 4644 nt1.93□□□□□ -2.1
RKR1Q04781 MMS22YLR320W 4365 nt1.93□□□□□ -2.1
RKR1Q04781 EAF5YEL018W 840 nt1.93□□□□□ -2.1
RKR1Q04781 tV(UAC)BtV(UAC)B 74 nt1.93□□□□□ -2.1
RKR1Q04781 tV(UAC)DtV(UAC)D 74 nt1.93□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 17.2 ms