Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.36■□□□□ 0.21
CFHR3Q02985 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CFHR3Q02985 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.36■□□□□ 0.21
CFHR3Q02985 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
CFHR3Q02985 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CFHR3Q02985 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CFHR3Q02985 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CFHR3Q02985 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CFHR3Q02985 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.36■□□□□ 0.21
CFHR3Q02985 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CFHR3Q02985 CROCCP5-201ENST00000436658 830 ntBASIC16.36■□□□□ 0.21
CFHR3Q02985 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.36■□□□□ 0.21
CFHR3Q02985 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.36■□□□□ 0.21
CFHR3Q02985 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.36■□□□□ 0.21
CFHR3Q02985 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.36■□□□□ 0.21
CFHR3Q02985 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.36■□□□□ 0.21
CFHR3Q02985 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CFHR3Q02985 AC079834.2-201ENST00000609776 1949 ntBASIC16.36■□□□□ 0.21
CFHR3Q02985 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.36■□□□□ 0.21
CFHR3Q02985 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CFHR3Q02985 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CFHR3Q02985 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CFHR3Q02985 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CFHR3Q02985 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CFHR3Q02985 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CFHR3Q02985 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.36■□□□□ 0.21
CFHR3Q02985 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.36■□□□□ 0.21
CFHR3Q02985 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.35■□□□□ 0.21
CFHR3Q02985 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
CFHR3Q02985 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.35■□□□□ 0.21
CFHR3Q02985 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CFHR3Q02985 BID-212ENST00000614949 1988 ntTSL 5 BASIC16.35■□□□□ 0.21
CFHR3Q02985 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CFHR3Q02985 AC007322.1-201ENST00000426983 750 ntBASIC16.35■□□□□ 0.21
CFHR3Q02985 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.35■□□□□ 0.21
CFHR3Q02985 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.35■□□□□ 0.21
CFHR3Q02985 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CFHR3Q02985 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.35■□□□□ 0.21
CFHR3Q02985 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.35■□□□□ 0.21
CFHR3Q02985 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
CFHR3Q02985 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.35■□□□□ 0.21
CFHR3Q02985 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CFHR3Q02985 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CFHR3Q02985 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CFHR3Q02985 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CFHR3Q02985 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CFHR3Q02985 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CFHR3Q02985 FBXW4P1-201ENST00000426721 2239 ntBASIC16.35■□□□□ 0.21
CFHR3Q02985 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.35■□□□□ 0.21
CFHR3Q02985 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CFHR3Q02985 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CFHR3Q02985 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CFHR3Q02985 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.34■□□□□ 0.21
CFHR3Q02985 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CFHR3Q02985 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CFHR3Q02985 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CFHR3Q02985 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CFHR3Q02985 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CFHR3Q02985 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.34■□□□□ 0.21
CFHR3Q02985 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.34■□□□□ 0.21
CFHR3Q02985 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CFHR3Q02985 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CFHR3Q02985 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CFHR3Q02985 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CFHR3Q02985 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CFHR3Q02985 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CFHR3Q02985 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CFHR3Q02985 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CFHR3Q02985 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.33■□□□□ 0.21
CFHR3Q02985 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CFHR3Q02985 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CFHR3Q02985 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CFHR3Q02985 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CFHR3Q02985 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.33■□□□□ 0.2
CFHR3Q02985 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CFHR3Q02985 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CFHR3Q02985 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.33■□□□□ 0.2
CFHR3Q02985 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.33■□□□□ 0.2
CFHR3Q02985 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.33■□□□□ 0.2
CFHR3Q02985 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CFHR3Q02985 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CFHR3Q02985 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.33■□□□□ 0.2
CFHR3Q02985 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CFHR3Q02985 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CFHR3Q02985 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.33■□□□□ 0.2
CFHR3Q02985 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CFHR3Q02985 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CFHR3Q02985 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.33■□□□□ 0.2
CFHR3Q02985 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.33■□□□□ 0.2
CFHR3Q02985 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CFHR3Q02985 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CFHR3Q02985 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CFHR3Q02985 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CFHR3Q02985 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.32■□□□□ 0.2
CFHR3Q02985 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CFHR3Q02985 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CFHR3Q02985 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CFHR3Q02985 MIR663A-201ENST00000385250 93 ntBASIC16.32■□□□□ 0.2
CFHR3Q02985 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.32■□□□□ 0.2
CFHR3Q02985 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms