Protein–RNA interactions for Protein: P82673

MRPS35, 28S ribosomal protein S35, mitochondrial, humanhuman

Known RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35P82673 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MRPS35P82673 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MRPS35P82673 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MRPS35P82673 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MRPS35P82673 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MRPS35P82673 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MRPS35P82673 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MRPS35P82673 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
MRPS35P82673 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.42■□□□□ 0.86
MRPS35P82673 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
MRPS35P82673 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
MRPS35P82673 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MRPS35P82673 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
MRPS35P82673 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
MRPS35P82673 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
MRPS35P82673 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.42■□□□□ 0.86
MRPS35P82673 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
MRPS35P82673 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MRPS35P82673 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MRPS35P82673 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MRPS35P82673 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.41■□□□□ 0.86
MRPS35P82673 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MRPS35P82673 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
MRPS35P82673 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MRPS35P82673 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.41■□□□□ 0.86
MRPS35P82673 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MRPS35P82673 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MRPS35P82673 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.41■□□□□ 0.86
MRPS35P82673 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
MRPS35P82673 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MRPS35P82673 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.41■□□□□ 0.86
MRPS35P82673 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.41■□□□□ 0.86
MRPS35P82673 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.41■□□□□ 0.86
MRPS35P82673 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.41■□□□□ 0.86
MRPS35P82673 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.41■□□□□ 0.86
MRPS35P82673 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.41■□□□□ 0.86
MRPS35P82673 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.41■□□□□ 0.86
MRPS35P82673 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
MRPS35P82673 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MRPS35P82673 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MRPS35P82673 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.41■□□□□ 0.86
MRPS35P82673 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MRPS35P82673 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MRPS35P82673 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
MRPS35P82673 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.41■□□□□ 0.86
MRPS35P82673 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MRPS35P82673 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.41■□□□□ 0.86
MRPS35P82673 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MRPS35P82673 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MRPS35P82673 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
MRPS35P82673 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
MRPS35P82673 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MRPS35P82673 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.4■□□□□ 0.86
MRPS35P82673 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.4■□□□□ 0.86
MRPS35P82673 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
MRPS35P82673 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MRPS35P82673 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MRPS35P82673 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.4■□□□□ 0.86
MRPS35P82673 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.4■□□□□ 0.86
MRPS35P82673 CA15P2-201ENST00000611168 834 ntBASIC20.4■□□□□ 0.86
MRPS35P82673 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MRPS35P82673 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.39■□□□□ 0.86
MRPS35P82673 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
MRPS35P82673 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
MRPS35P82673 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MRPS35P82673 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
MRPS35P82673 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MRPS35P82673 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MRPS35P82673 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.39■□□□□ 0.85
MRPS35P82673 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MRPS35P82673 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.39■□□□□ 0.85
MRPS35P82673 AC106739.1-201ENST00000617035 715 ntBASIC20.39■□□□□ 0.85
MRPS35P82673 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.39■□□□□ 0.85
MRPS35P82673 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
MRPS35P82673 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.39■□□□□ 0.85
MRPS35P82673 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.39■□□□□ 0.85
MRPS35P82673 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MRPS35P82673 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MRPS35P82673 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
MRPS35P82673 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MRPS35P82673 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
MRPS35P82673 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
MRPS35P82673 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MRPS35P82673 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
MRPS35P82673 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MRPS35P82673 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MRPS35P82673 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.38■□□□□ 0.85
MRPS35P82673 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MRPS35P82673 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.38■□□□□ 0.85
MRPS35P82673 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.38■□□□□ 0.85
MRPS35P82673 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.38■□□□□ 0.85
MRPS35P82673 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MRPS35P82673 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
MRPS35P82673 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MRPS35P82673 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MRPS35P82673 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
MRPS35P82673 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
MRPS35P82673 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MRPS35P82673 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.37■□□□□ 0.85
MRPS35P82673 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms