Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 NTF6G-201ENST00000591094 616 ntBASIC21.14■□□□□ 0.97
WNT3AP56704 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
WNT3AP56704 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.14■□□□□ 0.97
WNT3AP56704 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
WNT3AP56704 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
WNT3AP56704 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.14■□□□□ 0.97
WNT3AP56704 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
WNT3AP56704 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.14■□□□□ 0.97
WNT3AP56704 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
WNT3AP56704 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
WNT3AP56704 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
WNT3AP56704 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.13■□□□□ 0.97
WNT3AP56704 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.13■□□□□ 0.97
WNT3AP56704 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
WNT3AP56704 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
WNT3AP56704 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
WNT3AP56704 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
WNT3AP56704 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
WNT3AP56704 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
WNT3AP56704 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
WNT3AP56704 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
WNT3AP56704 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
WNT3AP56704 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
WNT3AP56704 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
WNT3AP56704 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.12■□□□□ 0.97
WNT3AP56704 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
WNT3AP56704 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
WNT3AP56704 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
WNT3AP56704 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
WNT3AP56704 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
WNT3AP56704 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
WNT3AP56704 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.12■□□□□ 0.97
WNT3AP56704 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.12■□□□□ 0.97
WNT3AP56704 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
WNT3AP56704 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
WNT3AP56704 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.12■□□□□ 0.97
WNT3AP56704 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
WNT3AP56704 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
WNT3AP56704 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.12■□□□□ 0.97
WNT3AP56704 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.11■□□□□ 0.97
WNT3AP56704 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
WNT3AP56704 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
WNT3AP56704 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
WNT3AP56704 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
WNT3AP56704 KRT19P1-201ENST00000405746 1186 ntBASIC21.11■□□□□ 0.97
WNT3AP56704 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.11■□□□□ 0.97
WNT3AP56704 SLC7A5P2-201ENST00000553010 536 ntBASIC21.11■□□□□ 0.97
WNT3AP56704 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
WNT3AP56704 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
WNT3AP56704 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
WNT3AP56704 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.11■□□□□ 0.97
WNT3AP56704 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
WNT3AP56704 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
WNT3AP56704 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.1■□□□□ 0.97
WNT3AP56704 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
WNT3AP56704 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.1■□□□□ 0.97
WNT3AP56704 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
WNT3AP56704 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.1■□□□□ 0.97
WNT3AP56704 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.1■□□□□ 0.97
WNT3AP56704 AC120498.10-201ENST00000621827 505 ntBASIC21.1■□□□□ 0.97
WNT3AP56704 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
WNT3AP56704 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.1■□□□□ 0.97
WNT3AP56704 KRT16P2-201ENST00000414673 1423 ntBASIC21.1■□□□□ 0.97
WNT3AP56704 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
WNT3AP56704 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
WNT3AP56704 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
WNT3AP56704 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
WNT3AP56704 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.09■□□□□ 0.97
WNT3AP56704 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
WNT3AP56704 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
WNT3AP56704 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
WNT3AP56704 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
WNT3AP56704 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.09■□□□□ 0.97
WNT3AP56704 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
WNT3AP56704 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
WNT3AP56704 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
WNT3AP56704 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
WNT3AP56704 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
WNT3AP56704 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
WNT3AP56704 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
WNT3AP56704 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
WNT3AP56704 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
WNT3AP56704 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
WNT3AP56704 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
WNT3AP56704 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.08■□□□□ 0.97
WNT3AP56704 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.08■□□□□ 0.97
WNT3AP56704 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
WNT3AP56704 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
WNT3AP56704 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
WNT3AP56704 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
WNT3AP56704 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
WNT3AP56704 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
WNT3AP56704 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
WNT3AP56704 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
WNT3AP56704 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.08■□□□□ 0.96
WNT3AP56704 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
WNT3AP56704 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
WNT3AP56704 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
WNT3AP56704 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
WNT3AP56704 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms