Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.98■□□□□ 0.79
POLR2JP52435 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.98■□□□□ 0.79
POLR2JP52435 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
POLR2JP52435 AC131281.2-201ENST00000520478 145 ntBASIC19.98■□□□□ 0.79
POLR2JP52435 AC133561.4-201ENST00000566112 224 ntBASIC19.98■□□□□ 0.79
POLR2JP52435 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
POLR2JP52435 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
POLR2JP52435 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
POLR2JP52435 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
POLR2JP52435 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
POLR2JP52435 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
POLR2JP52435 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
POLR2JP52435 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
POLR2JP52435 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
POLR2JP52435 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.97■□□□□ 0.79
POLR2JP52435 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
POLR2JP52435 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
POLR2JP52435 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.97■□□□□ 0.79
POLR2JP52435 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
POLR2JP52435 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
POLR2JP52435 BX842568.3-201ENST00000418104 571 ntBASIC19.97■□□□□ 0.79
POLR2JP52435 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
POLR2JP52435 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
POLR2JP52435 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.97■□□□□ 0.79
POLR2JP52435 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.97■□□□□ 0.79
POLR2JP52435 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
POLR2JP52435 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
POLR2JP52435 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
POLR2JP52435 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
POLR2JP52435 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
POLR2JP52435 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
POLR2JP52435 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.96■□□□□ 0.79
POLR2JP52435 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
POLR2JP52435 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
POLR2JP52435 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
POLR2JP52435 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
POLR2JP52435 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
POLR2JP52435 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.96■□□□□ 0.79
POLR2JP52435 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
POLR2JP52435 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
POLR2JP52435 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.96■□□□□ 0.79
POLR2JP52435 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
POLR2JP52435 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
POLR2JP52435 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.96■□□□□ 0.79
POLR2JP52435 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
POLR2JP52435 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
POLR2JP52435 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
POLR2JP52435 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.95■□□□□ 0.78
POLR2JP52435 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
POLR2JP52435 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
POLR2JP52435 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
POLR2JP52435 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
POLR2JP52435 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
POLR2JP52435 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
POLR2JP52435 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.95■□□□□ 0.78
POLR2JP52435 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.95■□□□□ 0.78
POLR2JP52435 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
POLR2JP52435 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.95■□□□□ 0.78
POLR2JP52435 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.95■□□□□ 0.78
POLR2JP52435 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.95■□□□□ 0.78
POLR2JP52435 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.95■□□□□ 0.78
POLR2JP52435 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
POLR2JP52435 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
POLR2JP52435 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
POLR2JP52435 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
POLR2JP52435 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
POLR2JP52435 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
POLR2JP52435 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
POLR2JP52435 AC009237.3-201ENST00000393279 1427 ntBASIC19.94■□□□□ 0.78
POLR2JP52435 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
POLR2JP52435 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
POLR2JP52435 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.94■□□□□ 0.78
POLR2JP52435 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.94■□□□□ 0.78
POLR2JP52435 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
POLR2JP52435 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
POLR2JP52435 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
POLR2JP52435 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
POLR2JP52435 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
POLR2JP52435 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
POLR2JP52435 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
POLR2JP52435 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
POLR2JP52435 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
POLR2JP52435 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
POLR2JP52435 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
POLR2JP52435 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
POLR2JP52435 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
POLR2JP52435 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
POLR2JP52435 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.93■□□□□ 0.78
POLR2JP52435 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
POLR2JP52435 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.93■□□□□ 0.78
POLR2JP52435 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
POLR2JP52435 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
POLR2JP52435 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.93■□□□□ 0.78
POLR2JP52435 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.93■□□□□ 0.78
POLR2JP52435 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
POLR2JP52435 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
POLR2JP52435 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
POLR2JP52435 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
POLR2JP52435 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
POLR2JP52435 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms