Protein–RNA interactions for Protein: P50750

CDK9, Cyclin-dependent kinase 9, humanhuman

Known RBP Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9P50750 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDK9P50750 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDK9P50750 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDK9P50750 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDK9P50750 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDK9P50750 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CDK9P50750 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDK9P50750 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.04■□□□□ 0.8
CDK9P50750 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDK9P50750 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDK9P50750 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDK9P50750 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.04■□□□□ 0.8
CDK9P50750 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.04■□□□□ 0.8
CDK9P50750 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDK9P50750 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDK9P50750 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.04■□□□□ 0.8
CDK9P50750 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.04■□□□□ 0.8
CDK9P50750 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CDK9P50750 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDK9P50750 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDK9P50750 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDK9P50750 AC003102.1-202ENST00000563394 1796 ntBASIC20.03■□□□□ 0.8
CDK9P50750 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDK9P50750 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDK9P50750 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDK9P50750 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.03■□□□□ 0.8
CDK9P50750 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.03■□□□□ 0.8
CDK9P50750 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.03■□□□□ 0.8
CDK9P50750 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CDK9P50750 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.03■□□□□ 0.8
CDK9P50750 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.03■□□□□ 0.8
CDK9P50750 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.03■□□□□ 0.8
CDK9P50750 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDK9P50750 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDK9P50750 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDK9P50750 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.03■□□□□ 0.8
CDK9P50750 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.03■□□□□ 0.8
CDK9P50750 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDK9P50750 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CDK9P50750 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDK9P50750 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDK9P50750 AP006587.3-201ENST00000525742 1516 ntBASIC20.02■□□□□ 0.8
CDK9P50750 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDK9P50750 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDK9P50750 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CDK9P50750 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDK9P50750 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CDK9P50750 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDK9P50750 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDK9P50750 IRS3P-201ENST00000223076 1006 ntBASIC20.02■□□□□ 0.8
CDK9P50750 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDK9P50750 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.8
CDK9P50750 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.02■□□□□ 0.8
CDK9P50750 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.02■□□□□ 0.8
CDK9P50750 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDK9P50750 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CDK9P50750 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDK9P50750 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDK9P50750 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDK9P50750 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.02■□□□□ 0.79
CDK9P50750 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.02■□□□□ 0.79
CDK9P50750 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CDK9P50750 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.01■□□□□ 0.79
CDK9P50750 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDK9P50750 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDK9P50750 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDK9P50750 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDK9P50750 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CDK9P50750 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDK9P50750 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.01■□□□□ 0.79
CDK9P50750 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.01■□□□□ 0.79
CDK9P50750 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.01■□□□□ 0.79
CDK9P50750 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDK9P50750 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDK9P50750 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDK9P50750 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDK9P50750 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDK9P50750 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDK9P50750 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20■□□□□ 0.79
CDK9P50750 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDK9P50750 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20■□□□□ 0.79
CDK9P50750 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDK9P50750 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDK9P50750 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20■□□□□ 0.79
CDK9P50750 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDK9P50750 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDK9P50750 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CDK9P50750 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20■□□□□ 0.79
CDK9P50750 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20■□□□□ 0.79
CDK9P50750 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDK9P50750 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDK9P50750 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDK9P50750 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
CDK9P50750 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
CDK9P50750 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20■□□□□ 0.79
CDK9P50750 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDK9P50750 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDK9P50750 LINC01006-201ENST00000333319 2292 ntBASIC20■□□□□ 0.79
CDK9P50750 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDK9P50750 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms