Protein–RNA interactions for Protein: P48743

RFX1, RFX-like DNA-binding protein RFX1, yeastyeast

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFX1P48743 LEE1YPL054W 906 nt3.7□□□□□ -1.82
RFX1P48743 AFT2YPL202C 1251 nt3.7□□□□□ -1.82
RFX1P48743 TPK2YPL203W 1143 nt3.7□□□□□ -1.82
RFX1P48743 DER1YBR201W 636 nt3.7□□□□□ -1.82
RFX1P48743 snR41snR41 95 nt3.7□□□□□ -1.82
RFX1P48743 MIP6YHR015W 1980 nt3.7□□□□□ -1.82
RFX1P48743 KIP3YGL216W 2418 nt3.7□□□□□ -1.82
RFX1P48743 YLR352WYLR352W 2424 nt3.7□□□□□ -1.82
RFX1P48743 NUP85YJR042W 2235 nt3.7□□□□□ -1.82
RFX1P48743 ALA1YOR335C 2877 nt3.69□□□□□ -1.82
RFX1P48743 SLK19YOR195W 2466 nt3.69□□□□□ -1.82
RFX1P48743 MTR4YJL050W 3222 nt3.69□□□□□ -1.82
RFX1P48743 YDR133CYDR133C 336 nt3.69□□□□□ -1.82
RFX1P48743 CGR1YGL029W 363 nt3.69□□□□□ -1.82
RFX1P48743 YGL039WYGL039W 1047 nt3.69□□□□□ -1.82
RFX1P48743 SPT4YGR063C 309 nt3.69□□□□□ -1.82
RFX1P48743 YHL026CYHL026C 948 nt3.69□□□□□ -1.82
RFX1P48743 YIR036W-AYIR036W-A 402 nt3.69□□□□□ -1.82
RFX1P48743 ACF4YJR083C 930 nt3.69□□□□□ -1.82
RFX1P48743 SDO1YLR022C 753 nt3.69□□□□□ -1.82
RFX1P48743 INO4YOL108C 456 nt3.69□□□□□ -1.82
RFX1P48743 IDH2YOR136W 1110 nt3.69□□□□□ -1.82
RFX1P48743 snR17asnR17a 333 nt3.69□□□□□ -1.82
RFX1P48743 MSD1YPL104W 1977 nt3.69□□□□□ -1.82
RFX1P48743 RRN6YBL014C 2685 nt3.68□□□□□ -1.82
RFX1P48743 AAD3YCR107W 1092 nt3.68□□□□□ -1.82
RFX1P48743 HNT1YDL125C 477 nt3.68□□□□□ -1.82
RFX1P48743 YDR262WYDR262W 819 nt3.68□□□□□ -1.82
RFX1P48743 TMA19YKL056C 504 nt3.68□□□□□ -1.82
RFX1P48743 PRM15YMR278W 1869 nt3.68□□□□□ -1.82
RFX1P48743 RNT1YMR239C 1416 nt3.68□□□□□ -1.82
RFX1P48743 PIN4YBL051C 2007 nt3.68□□□□□ -1.82
RFX1P48743 PEP7YDR323C 1548 nt3.67□□□□□ -1.82
RFX1P48743 YDR464C-AYDR464C-A 189 nt3.67□□□□□ -1.82
RFX1P48743 SUP56tL(CAA)A 82 nt3.67□□□□□ -1.82
RFX1P48743 SUP53tL(CAA)C 82 nt3.67□□□□□ -1.82
RFX1P48743 tL(CAA)DtL(CAA)D 82 nt3.67□□□□□ -1.82
RFX1P48743 tL(CAA)G1tL(CAA)G1 82 nt3.67□□□□□ -1.82
RFX1P48743 SUP54tL(CAA)G2 82 nt3.67□□□□□ -1.82
RFX1P48743 tL(CAA)G3tL(CAA)G3 82 nt3.67□□□□□ -1.82
RFX1P48743 tL(CAA)KtL(CAA)K 82 nt3.67□□□□□ -1.82
RFX1P48743 tL(CAA)LtL(CAA)L 82 nt3.67□□□□□ -1.82
RFX1P48743 tL(CAA)MtL(CAA)M 82 nt3.67□□□□□ -1.82
RFX1P48743 tL(CAA)NtL(CAA)N 82 nt3.67□□□□□ -1.82
RFX1P48743 VMA10YHR039C-A 345 nt3.67□□□□□ -1.82
RFX1P48743 RPI1YIL119C 1224 nt3.67□□□□□ -1.82
RFX1P48743 RPA12YJR063W 378 nt3.67□□□□□ -1.82
RFX1P48743 RPL6BYLR448W 531 nt3.67□□□□□ -1.82
RFX1P48743 SVS1YPL163C 783 nt3.67□□□□□ -1.82
RFX1P48743 ALG14YBR070C 714 nt3.67□□□□□ -1.82
RFX1P48743 RPC40YPR110C 1008 nt3.67□□□□□ -1.82
RFX1P48743 YBR103C-AYBR103C-A 144 nt3.67□□□□□ -1.82
RFX1P48743 SWC4YGR002C 1431 nt3.67□□□□□ -1.82
RFX1P48743 VPS53YJL029C 2469 nt3.66□□□□□ -1.82
RFX1P48743 APC5YOR249C 2058 nt3.66□□□□□ -1.82
RFX1P48743 EBS1YDR206W 2655 nt3.66□□□□□ -1.82
RFX1P48743 RPS29BYDL061C 171 nt3.66□□□□□ -1.82
RFX1P48743 CPR5YDR304C 678 nt3.66□□□□□ -1.82
RFX1P48743 ECL1YGR146C 636 nt3.66□□□□□ -1.82
RFX1P48743 AFB1YLR040C 675 nt3.66□□□□□ -1.82
RFX1P48743 YLR224WYLR224W 1110 nt3.66□□□□□ -1.82
RFX1P48743 YOR029WYOR029W 336 nt3.66□□□□□ -1.82
RFX1P48743 SSM4YIL030C 3960 nt3.66□□□□□ -1.82
RFX1P48743 PRP22YER013W 3438 nt3.66□□□□□ -1.82
RFX1P48743 FKH2YNL068C 2589 nt3.66□□□□□ -1.82
RFX1P48743 GPI13YLL031C 3054 nt3.65□□□□□ -1.82
RFX1P48743 APL4YPR029C 2499 nt3.65□□□□□ -1.82
RFX1P48743 FMP10YER182W 735 nt3.65□□□□□ -1.83
RFX1P48743 SPO13YHR014W 876 nt3.65□□□□□ -1.83
RFX1P48743 YIR020CYIR020C 303 nt3.65□□□□□ -1.83
RFX1P48743 SOD1YJR104C 465 nt3.65□□□□□ -1.83
RFX1P48743 VPH2YKL119C 648 nt3.65□□□□□ -1.83
RFX1P48743 TDA8YAL064C-A 381 nt3.65□□□□□ -1.83
RFX1P48743 ERG2YMR202W 669 nt3.65□□□□□ -1.83
RFX1P48743 LDS2YOL047C 1071 nt3.65□□□□□ -1.83
RFX1P48743 RPL18AYOL120C 561 nt3.65□□□□□ -1.83
RFX1P48743 TGL3YMR313C 1929 nt3.65□□□□□ -1.83
RFX1P48743 ATG26YLR189C 3597 nt3.65□□□□□ -1.83
RFX1P48743 HUR1YGL168W 333 nt3.64□□□□□ -1.83
RFX1P48743 YGR039WYGR039W 312 nt3.64□□□□□ -1.83
RFX1P48743 MTM1YGR257C 1101 nt3.64□□□□□ -1.83
RFX1P48743 PCL5YHR071W 690 nt3.64□□□□□ -1.83
RFX1P48743 IRC19YLL033W 693 nt3.64□□□□□ -1.83
RFX1P48743 HRI1YLR301W 735 nt3.64□□□□□ -1.83
RFX1P48743 YBL028CYBL028C 321 nt3.64□□□□□ -1.83
RFX1P48743 RPS16AYMR143W 432 nt3.64□□□□□ -1.83
RFX1P48743 YMR153C-AYMR153C-A 336 nt3.64□□□□□ -1.83
RFX1P48743 YNL058CYNL058C 951 nt3.64□□□□□ -1.83
RFX1P48743 CAT5YOR125C 702 nt3.64□□□□□ -1.83
RFX1P48743 YPR050CYPR050C 414 nt3.64□□□□□ -1.83
RFX1P48743 AVT5YBL089W 1380 nt3.63□□□□□ -1.83
RFX1P48743 SHE4YOR035C 2370 nt3.63□□□□□ -1.83
RFX1P48743 ISM1YPL040C 3009 nt3.63□□□□□ -1.83
RFX1P48743 AVT2YEL064C 1443 nt3.63□□□□□ -1.83
RFX1P48743 KRE5YOR336W 4098 nt3.63□□□□□ -1.83
RFX1P48743 snR59snR59 78 nt3.63□□□□□ -1.83
RFX1P48743 MRPL11YDL202W 750 nt3.63□□□□□ -1.83
RFX1P48743 YEL075CYEL075C 369 nt3.63□□□□□ -1.83
RFX1P48743 YAP3YHL009C 993 nt3.63□□□□□ -1.83
RFX1P48743 YIL141WYIL141W 390 nt3.63□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 16.7 ms