Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCP4P48539 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCP4P48539 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.54□□□□□ -0.08
PCP4P48539 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCP4P48539 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.54□□□□□ -0.08
PCP4P48539 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCP4P48539 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PCP4P48539 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCP4P48539 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCP4P48539 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCP4P48539 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCP4P48539 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCP4P48539 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCP4P48539 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCP4P48539 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCP4P48539 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCP4P48539 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCP4P48539 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC14.54□□□□□ -0.08
PCP4P48539 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCP4P48539 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.54□□□□□ -0.08
PCP4P48539 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCP4P48539 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCP4P48539 PCDHA1-201ENST00000378133 2726 ntBASIC14.54□□□□□ -0.08
PCP4P48539 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCP4P48539 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCP4P48539 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PCP4P48539 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCP4P48539 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCP4P48539 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCP4P48539 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.53□□□□□ -0.08
PCP4P48539 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.53□□□□□ -0.08
PCP4P48539 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCP4P48539 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCP4P48539 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.53□□□□□ -0.08
PCP4P48539 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PCP4P48539 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCP4P48539 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCP4P48539 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCP4P48539 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCP4P48539 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCP4P48539 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCP4P48539 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCP4P48539 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCP4P48539 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCP4P48539 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PCP4P48539 PKD1P5-201ENST00000532415 10291 ntBASIC14.53□□□□□ -0.08
PCP4P48539 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCP4P48539 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PCP4P48539 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCP4P48539 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCP4P48539 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PCP4P48539 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PCP4P48539 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PCP4P48539 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCP4P48539 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.53□□□□□ -0.08
PCP4P48539 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCP4P48539 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCP4P48539 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PCP4P48539 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCP4P48539 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.53□□□□□ -0.08
PCP4P48539 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCP4P48539 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
PCP4P48539 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCP4P48539 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.52□□□□□ -0.08
PCP4P48539 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCP4P48539 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCP4P48539 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.52□□□□□ -0.08
PCP4P48539 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCP4P48539 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCP4P48539 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCP4P48539 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCP4P48539 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
PCP4P48539 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCP4P48539 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCP4P48539 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCP4P48539 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCP4P48539 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCP4P48539 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCP4P48539 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
PCP4P48539 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
PCP4P48539 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PCP4P48539 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCP4P48539 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PCP4P48539 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.51□□□□□ -0.09
PCP4P48539 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCP4P48539 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCP4P48539 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCP4P48539 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCP4P48539 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
PCP4P48539 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PCP4P48539 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
PCP4P48539 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCP4P48539 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCP4P48539 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PCP4P48539 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC14.51□□□□□ -0.09
PCP4P48539 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
PCP4P48539 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCP4P48539 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
PCP4P48539 AC093503.3-201ENST00000624917 2352 ntBASIC14.51□□□□□ -0.09
PCP4P48539 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms