Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A3P43003 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SLC1A3P43003 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC1A3P43003 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A3P43003 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A3P43003 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A3P43003 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A3P43003 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC1A3P43003 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A3P43003 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A3P43003 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A3P43003 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
SLC1A3P43003 LINC02228-203ENST00000641970 1355 ntBASIC19.19■□□□□ 0.66
SLC1A3P43003 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SLC1A3P43003 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A3P43003 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC1A3P43003 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SLC1A3P43003 ZNRF2P3-201ENST00000424200 374 ntBASIC19.18■□□□□ 0.66
SLC1A3P43003 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A3P43003 AC123595.1-201ENST00000440769 1046 ntBASIC19.18■□□□□ 0.66
SLC1A3P43003 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC1A3P43003 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.18■□□□□ 0.66
SLC1A3P43003 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC1A3P43003 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC1A3P43003 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC1A3P43003 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC1A3P43003 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A3P43003 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A3P43003 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A3P43003 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A3P43003 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC1A3P43003 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A3P43003 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A3P43003 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC1A3P43003 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC1A3P43003 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A3P43003 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC1A3P43003 AC079140.4-201ENST00000507448 529 ntBASIC19.17■□□□□ 0.66
SLC1A3P43003 EEF1DP3-203ENST00000566025 782 ntBASIC19.17■□□□□ 0.66
SLC1A3P43003 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC1A3P43003 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A3P43003 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A3P43003 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A3P43003 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A3P43003 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SLC1A3P43003 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A3P43003 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC1A3P43003 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SLC1A3P43003 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC1A3P43003 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC1A3P43003 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC1A3P43003 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC1A3P43003 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC1A3P43003 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC1A3P43003 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC1A3P43003 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC1A3P43003 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC1A3P43003 YBX1P1-201ENST00000445822 960 ntBASIC19.16■□□□□ 0.66
SLC1A3P43003 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SLC1A3P43003 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC1A3P43003 AC053503.5-201ENST00000601508 636 ntBASIC19.16■□□□□ 0.66
SLC1A3P43003 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.16■□□□□ 0.66
SLC1A3P43003 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SLC1A3P43003 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC1A3P43003 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC1A3P43003 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC1A3P43003 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC1A3P43003 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
SLC1A3P43003 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC1A3P43003 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.15■□□□□ 0.66
SLC1A3P43003 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC1A3P43003 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC1A3P43003 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC1A3P43003 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC1A3P43003 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC1A3P43003 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC1A3P43003 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC1A3P43003 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC1A3P43003 KRT87P-202ENST00000534226 1464 ntBASIC19.15■□□□□ 0.66
SLC1A3P43003 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC1A3P43003 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SLC1A3P43003 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC1A3P43003 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC1A3P43003 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.14■□□□□ 0.66
SLC1A3P43003 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SLC1A3P43003 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SLC1A3P43003 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.14■□□□□ 0.65
SLC1A3P43003 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC1A3P43003 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC1A3P43003 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SLC1A3P43003 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC1A3P43003 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.14■□□□□ 0.65
SLC1A3P43003 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC1A3P43003 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC1A3P43003 MIR935-201ENST00000401179 91 ntBASIC19.14■□□□□ 0.65
SLC1A3P43003 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC1A3P43003 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC1A3P43003 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC1A3P43003 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC1A3P43003 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms