Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 YPL107WYPL107W 747 nt2.49□□□□□ -2.01
CDC40P40968 YPL142CYPL142C 318 nt2.49□□□□□ -2.01
CDC40P40968 IKI3YLR384C 4050 nt2.49□□□□□ -2.01
CDC40P40968 NUR1YDL089W 1455 nt2.48□□□□□ -2.01
CDC40P40968 FUS2YMR232W 2034 nt2.48□□□□□ -2.01
CDC40P40968 MET10YFR030W 3108 nt2.48□□□□□ -2.01
CDC40P40968 GEA1YJR031C 4227 nt2.48□□□□□ -2.01
CDC40P40968 YER138W-AYER138W-A 105 nt2.48□□□□□ -2.01
CDC40P40968 SAE2YGL175C 1038 nt2.48□□□□□ -2.01
CDC40P40968 MIG2YGL209W 1149 nt2.48□□□□□ -2.01
CDC40P40968 AIM23YJL131C 1071 nt2.48□□□□□ -2.01
CDC40P40968 ERG20YJL167W 1059 nt2.48□□□□□ -2.01
CDC40P40968 PIR1YKL164C 1026 nt2.48□□□□□ -2.01
CDC40P40968 YKE2YLR200W 345 nt2.48□□□□□ -2.01
CDC40P40968 YLR297WYLR297W 390 nt2.48□□□□□ -2.01
CDC40P40968 YBL107W-AYBL107W-A 105 nt2.48□□□□□ -2.01
CDC40P40968 TYE7YOR344C 876 nt2.48□□□□□ -2.01
CDC40P40968 RRG8YPR116W 834 nt2.48□□□□□ -2.01
CDC40P40968 CDC20YGL116W 1833 nt2.47□□□□□ -2.01
CDC40P40968 CEP3YMR168C 1827 nt2.47□□□□□ -2.01
CDC40P40968 KAR1YNL188W 1302 nt2.47□□□□□ -2.01
CDC40P40968 JSN1YJR091C 3276 nt2.47□□□□□ -2.01
CDC40P40968 KEI1YDR367W 666 nt2.47□□□□□ -2.01
CDC40P40968 GUK1YDR454C 564 nt2.47□□□□□ -2.01
CDC40P40968 SLD5YDR489W 885 nt2.47□□□□□ -2.01
CDC40P40968 SVP26YHR181W 687 nt2.47□□□□□ -2.01
CDC40P40968 YHR214C-DYHR214C-D 294 nt2.47□□□□□ -2.01
CDC40P40968 YIL068W-AYIL068W-A 384 nt2.47□□□□□ -2.01
CDC40P40968 YAR069CYAR069C 294 nt2.47□□□□□ -2.01
CDC40P40968 PDS5YMR076C 3834 nt2.47□□□□□ -2.01
CDC40P40968 YOL107WYOL107W 1029 nt2.47□□□□□ -2.01
CDC40P40968 YOR366WYOR366W 354 nt2.47□□□□□ -2.01
CDC40P40968 KAR4YCL055W 1008 nt2.47□□□□□ -2.01
CDC40P40968 TAF2YCR042C 4224 nt2.47□□□□□ -2.01
CDC40P40968 SLP1YOR154W 1764 nt2.46□□□□□ -2.02
CDC40P40968 RUB1YDR139C 234 nt2.46□□□□□ -2.02
CDC40P40968 HIM1YDR317W 1245 nt2.46□□□□□ -2.02
CDC40P40968 OTU2YHL013C 924 nt2.46□□□□□ -2.02
CDC40P40968 YHL048C-AYHL048C-A 135 nt2.46□□□□□ -2.02
CDC40P40968 YLR050CYLR050C 486 nt2.46□□□□□ -2.02
CDC40P40968 CWC24YLR323C 780 nt2.46□□□□□ -2.02
CDC40P40968 CUP9YPL177C 921 nt2.46□□□□□ -2.02
CDC40P40968 AFT2YPL202C 1251 nt2.46□□□□□ -2.02
CDC40P40968 NTC20YBR188C 423 nt2.46□□□□□ -2.02
CDC40P40968 PEX34YCL056C 435 nt2.46□□□□□ -2.02
CDC40P40968 RLI1YDR091C 1827 nt2.46□□□□□ -2.02
CDC40P40968 SPB1YCL054W 2526 nt2.46□□□□□ -2.02
CDC40P40968 NSA1YGL111W 1392 nt2.46□□□□□ -2.02
CDC40P40968 KIN82YCR091W 2163 nt2.46□□□□□ -2.02
CDC40P40968 SRB8YCR081W 4284 nt2.45□□□□□ -2.02
CDC40P40968 FAA2YER015W 2235 nt2.45□□□□□ -2.02
CDC40P40968 AST2YER101C 1293 nt2.45□□□□□ -2.02
CDC40P40968 QCR10YHR001W-A 234 nt2.45□□□□□ -2.02
CDC40P40968 YHR086W-AYHR086W-A 162 nt2.45□□□□□ -2.02
CDC40P40968 LSM12YHR121W 564 nt2.45□□□□□ -2.02
CDC40P40968 YIL012WYIL012W 342 nt2.45□□□□□ -2.02
CDC40P40968 YIR036W-AYIR036W-A 402 nt2.45□□□□□ -2.02
CDC40P40968 CPR7YJR032W 1182 nt2.45□□□□□ -2.02
CDC40P40968 ATG10YLL042C 504 nt2.45□□□□□ -2.02
CDC40P40968 YBL062WYBL062W 381 nt2.45□□□□□ -2.02
CDC40P40968 VAM3YOR106W 852 nt2.45□□□□□ -2.02
CDC40P40968 HEM4YOR278W 828 nt2.45□□□□□ -2.02
CDC40P40968 HUA2YOR284W 732 nt2.45□□□□□ -2.02
CDC40P40968 DNM1YLL001W 2274 nt2.45□□□□□ -2.02
CDC40P40968 YIL169CYIL169C 2988 nt2.45□□□□□ -2.02
CDC40P40968 COM2YER130C 1332 nt2.44□□□□□ -2.02
CDC40P40968 ASI3YNL008C 2031 nt2.44□□□□□ -2.02
CDC40P40968 SSN2YDR443C 4263 nt2.44□□□□□ -2.02
CDC40P40968 MAK11YKL021C 1407 nt2.44□□□□□ -2.02
CDC40P40968 RAX2YLR084C 3663 nt2.44□□□□□ -2.02
CDC40P40968 YER046W-AYER046W-A 330 nt2.44□□□□□ -2.02
CDC40P40968 ERV1YGR029W 570 nt2.44□□□□□ -2.02
CDC40P40968 RPL24BYGR148C 468 nt2.44□□□□□ -2.02
CDC40P40968 RTS3YGR161C 792 nt2.44□□□□□ -2.02
CDC40P40968 MTM1YGR257C 1101 nt2.44□□□□□ -2.02
CDC40P40968 YHL002C-AYHL002C-A 489 nt2.44□□□□□ -2.02
CDC40P40968 THP2YHR167W 786 nt2.44□□□□□ -2.02
CDC40P40968 ECM4YKR076W 1113 nt2.44□□□□□ -2.02
CDC40P40968 ESA1YOR244W 1338 nt2.43□□□□□ -2.02
CDC40P40968 YKU80YMR106C 1890 nt2.43□□□□□ -2.02
CDC40P40968 SRD1YCR018C 666 nt2.43□□□□□ -2.02
CDC40P40968 YER107W-AYER107W-A 321 nt2.43□□□□□ -2.02
CDC40P40968 MTC3YGL226W 372 nt2.43□□□□□ -2.02
CDC40P40968 CUP1-1YHR053C 186 nt2.43□□□□□ -2.02
CDC40P40968 CUP1-2YHR055C 186 nt2.43□□□□□ -2.02
CDC40P40968 YJR056CYJR056C 711 nt2.43□□□□□ -2.02
CDC40P40968 YAL037WYAL037W 804 nt2.43□□□□□ -2.02
CDC40P40968 YLR169WYLR169W 354 nt2.43□□□□□ -2.02
CDC40P40968 YLR339CYLR339C 552 nt2.43□□□□□ -2.02
CDC40P40968 MPP6YNR024W 561 nt2.43□□□□□ -2.02
CDC40P40968 ISU1YPL135W 498 nt2.43□□□□□ -2.02
CDC40P40968 YPR014CYPR014C 330 nt2.43□□□□□ -2.02
CDC40P40968 DNF1YER166W 4716 nt2.43□□□□□ -2.02
CDC40P40968 ILS1YBL076C 3219 nt2.43□□□□□ -2.02
CDC40P40968 APC2YLR127C 2562 nt2.43□□□□□ -2.02
CDC40P40968 SAP1YER047C 2694 nt2.43□□□□□ -2.02
CDC40P40968 CST9YLR394W 1449 nt2.42□□□□□ -2.02
CDC40P40968 DNL4YOR005C 2835 nt2.42□□□□□ -2.02
CDC40P40968 EDS1YBR033W 2760 nt2.42□□□□□ -2.02
CDC40P40968 ANR2YKL047W 1551 nt2.42□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 39.6 ms