Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
COL15A1P39059 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC26.7■■□□□ 1.86
COL15A1P39059 GATS-209ENST00000454084 1030 ntTSL 3 BASIC26.7■■□□□ 1.86
COL15A1P39059 UNC93B4-201ENST00000505679 747 ntBASIC26.7■■□□□ 1.86
COL15A1P39059 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC26.7■■□□□ 1.86
COL15A1P39059 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
COL15A1P39059 FAM21FP-204ENST00000608637 956 ntBASIC26.7■■□□□ 1.86
COL15A1P39059 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
COL15A1P39059 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.86
COL15A1P39059 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL15A1P39059 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC26.69■■□□□ 1.86
COL15A1P39059 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL15A1P39059 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
COL15A1P39059 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
COL15A1P39059 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC26.69■■□□□ 1.86
COL15A1P39059 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL15A1P39059 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC26.69■■□□□ 1.86
COL15A1P39059 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL15A1P39059 LTK-203ENST00000453182 2412 ntTSL 2 BASIC26.69■■□□□ 1.86
COL15A1P39059 CASP6-205ENST00000505486 538 ntTSL 4 BASIC26.69■■□□□ 1.86
COL15A1P39059 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC26.69■■□□□ 1.86
COL15A1P39059 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL15A1P39059 GALC-202ENST00000393568 2054 ntTSL 2 BASIC26.68■■□□□ 1.86
COL15A1P39059 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC26.68■■□□□ 1.86
COL15A1P39059 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
COL15A1P39059 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC26.68■■□□□ 1.86
COL15A1P39059 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC26.68■■□□□ 1.86
COL15A1P39059 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC26.68■■□□□ 1.86
COL15A1P39059 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
COL15A1P39059 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
COL15A1P39059 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
COL15A1P39059 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
COL15A1P39059 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
COL15A1P39059 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC26.67■■□□□ 1.86
COL15A1P39059 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
COL15A1P39059 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
COL15A1P39059 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
COL15A1P39059 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
COL15A1P39059 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
COL15A1P39059 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
COL15A1P39059 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
COL15A1P39059 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC26.67■■□□□ 1.86
COL15A1P39059 RPS2P4-201ENST00000476944 856 ntBASIC26.67■■□□□ 1.86
COL15A1P39059 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC26.67■■□□□ 1.86
COL15A1P39059 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC26.67■■□□□ 1.86
COL15A1P39059 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC26.67■■□□□ 1.86
COL15A1P39059 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
COL15A1P39059 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
COL15A1P39059 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
COL15A1P39059 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL15A1P39059 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
COL15A1P39059 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL15A1P39059 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
COL15A1P39059 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
COL15A1P39059 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL15A1P39059 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL15A1P39059 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC26.66■■□□□ 1.86
COL15A1P39059 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC26.66■■□□□ 1.86
COL15A1P39059 AC008403.3-201ENST00000598924 454 ntBASIC26.66■■□□□ 1.86
COL15A1P39059 CYP2T3P-201ENST00000601990 817 ntBASIC26.66■■□□□ 1.86
COL15A1P39059 AC242852.2-201ENST00000615738 1807 ntBASIC26.65■■□□□ 1.86
COL15A1P39059 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
COL15A1P39059 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
COL15A1P39059 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC26.65■■□□□ 1.86
COL15A1P39059 NME6-213ENST00000451657 871 ntTSL 2 BASIC26.65■■□□□ 1.86
COL15A1P39059 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC26.65■■□□□ 1.86
COL15A1P39059 USP36-216ENST00000589424 970 ntTSL 5 BASIC26.65■■□□□ 1.86
COL15A1P39059 AC060766.5-201ENST00000590539 871 ntBASIC26.65■■□□□ 1.86
COL15A1P39059 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC26.65■■□□□ 1.86
COL15A1P39059 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC26.65■■□□□ 1.86
COL15A1P39059 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC26.65■■□□□ 1.86
COL15A1P39059 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
COL15A1P39059 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
COL15A1P39059 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL15A1P39059 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
COL15A1P39059 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
COL15A1P39059 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC26.64■■□□□ 1.86
COL15A1P39059 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
COL15A1P39059 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
COL15A1P39059 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC26.64■■□□□ 1.86
COL15A1P39059 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC26.64■■□□□ 1.86
COL15A1P39059 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
COL15A1P39059 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC26.64■■□□□ 1.86
COL15A1P39059 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
COL15A1P39059 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
COL15A1P39059 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
COL15A1P39059 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
COL15A1P39059 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC26.63■■□□□ 1.85
COL15A1P39059 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC26.63■■□□□ 1.85
COL15A1P39059 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC26.63■■□□□ 1.85
COL15A1P39059 AC100791.3-201ENST00000617619 330 ntBASIC26.63■■□□□ 1.85
COL15A1P39059 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL15A1P39059 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC26.63■■□□□ 1.85
COL15A1P39059 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
COL15A1P39059 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL15A1P39059 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL15A1P39059 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC26.63■■□□□ 1.85
COL15A1P39059 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL15A1P39059 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL15A1P39059 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms