Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 YPP1YGR198W 2454 nt2.56□□□□□ -2
TDA11P38854 EMI1YDR512C 564 nt2.55□□□□□ -2
TDA11P38854 YGL039WYGL039W 1047 nt2.55□□□□□ -2
TDA11P38854 VEL1YGL258W 621 nt2.55□□□□□ -2
TDA11P38854 ALB1YJL122W 528 nt2.55□□□□□ -2
TDA11P38854 YKL065W-AYKL065W-A 222 nt2.55□□□□□ -2
TDA11P38854 SED5YLR026C 1023 nt2.55□□□□□ -2
TDA11P38854 YML090WYML090W 387 nt2.55□□□□□ -2
TDA11P38854 MUB1YMR100W 1863 nt2.55□□□□□ -2
TDA11P38854 SAS2YMR127C 1017 nt2.55□□□□□ -2
TDA11P38854 YPL135C-AYPL135C-A 174 nt2.55□□□□□ -2
TDA11P38854 URB2YJR041C 3525 nt2.55□□□□□ -2
TDA11P38854 MSH4YFL003C 2637 nt2.55□□□□□ -2
TDA11P38854 BCK1YJL095W 4437 nt2.54□□□□□ -2
TDA11P38854 SLP1YOR154W 1764 nt2.54□□□□□ -2
TDA11P38854 YDR034C-DYDR034C-D 5313 nt2.54□□□□□ -2
TDA11P38854 YDR210W-BYDR210W-B 5313 nt2.54□□□□□ -2
TDA11P38854 YLR410W-BYLR410W-B 5313 nt2.54□□□□□ -2
TDA11P38854 snR68snR68 136 nt2.54□□□□□ -2
TDA11P38854 snR70snR70 164 nt2.54□□□□□ -2
TDA11P38854 NRG1YDR043C 696 nt2.54□□□□□ -2
TDA11P38854 CPR5YDR304C 678 nt2.54□□□□□ -2
TDA11P38854 MPC1YGL080W 393 nt2.54□□□□□ -2
TDA11P38854 YGL159WYGL159W 1113 nt2.54□□□□□ -2
TDA11P38854 MCR1YKL150W 909 nt2.54□□□□□ -2
TDA11P38854 YMR306C-AYMR306C-A 390 nt2.54□□□□□ -2
TDA11P38854 ATG3YNR007C 933 nt2.54□□□□□ -2
TDA11P38854 TYE7YOR344C 876 nt2.54□□□□□ -2
TDA11P38854 YPL276WYPL276W 438 nt2.54□□□□□ -2
TDA11P38854 snR35snR35 204 nt2.54□□□□□ -2
TDA11P38854 MET6YER091C 2304 nt2.54□□□□□ -2
TDA11P38854 NAB6YML117W 3405 nt2.54□□□□□ -2
TDA11P38854 BI3Q0115 1554 nt2.53□□□□□ -2
TDA11P38854 ORC1YML065W 2745 nt2.53□□□□□ -2
TDA11P38854 GIC2YDR309C 1152 nt2.53□□□□□ -2
TDA11P38854 YFH7YFR007W 1062 nt2.53□□□□□ -2
TDA11P38854 ERP6YGL002W 651 nt2.53□□□□□ -2
TDA11P38854 YJL169WYJL169W 369 nt2.53□□□□□ -2
TDA11P38854 YLR154W-EYLR154W-E 204 nt2.53□□□□□ -2
TDA11P38854 MST28YAR033W 705 nt2.53□□□□□ -2
TDA11P38854 SEC4YFL005W 648 nt2.52□□□□□ -2.01
TDA11P38854 YHL044WYHL044W 708 nt2.52□□□□□ -2.01
TDA11P38854 TCD1YHR003C 1290 nt2.52□□□□□ -2.01
TDA11P38854 YHR212CYHR212C 336 nt2.52□□□□□ -2.01
TDA11P38854 PSF2YJL072C 642 nt2.52□□□□□ -2.01
TDA11P38854 YKR070WYKR070W 1059 nt2.52□□□□□ -2.01
TDA11P38854 CDC123YLR215C 1083 nt2.52□□□□□ -2.01
TDA11P38854 YAR060CYAR060C 336 nt2.52□□□□□ -2.01
TDA11P38854 PDS5YMR076C 3834 nt2.52□□□□□ -2.01
TDA11P38854 YMR187CYMR187C 1296 nt2.52□□□□□ -2.01
TDA11P38854 MPD2YOL088C 834 nt2.52□□□□□ -2.01
TDA11P38854 HSP10YOR020C 321 nt2.52□□□□□ -2.01
TDA11P38854 UFE1YOR075W 1041 nt2.52□□□□□ -2.01
TDA11P38854 snR44snR44 211 nt2.52□□□□□ -2.01
TDA11P38854 NOP56YLR197W 1515 nt2.52□□□□□ -2.01
TDA11P38854 PSY2YNL201C 2577 nt2.52□□□□□ -2.01
TDA11P38854 GCD10YNL062C 1437 nt2.51□□□□□ -2.01
TDA11P38854 SEN54YPL083C 1404 nt2.51□□□□□ -2.01
TDA11P38854 YGL176CYGL176C 1665 nt2.51□□□□□ -2.01
TDA11P38854 YDR061WYDR061W 1620 nt2.51□□□□□ -2.01
TDA11P38854 YCK2YNL154C 1641 nt2.51□□□□□ -2.01
TDA11P38854 UBC9YDL064W 474 nt2.51□□□□□ -2.01
TDA11P38854 BUD26YDR241W 288 nt2.51□□□□□ -2.01
TDA11P38854 YGL177WYGL177W 348 nt2.51□□□□□ -2.01
TDA11P38854 YGR293CYGR293C 462 nt2.51□□□□□ -2.01
TDA11P38854 DSE2YHR143W 978 nt2.51□□□□□ -2.01
TDA11P38854 BET3YKR068C 582 nt2.51□□□□□ -2.01
TDA11P38854 YLR339CYLR339C 552 nt2.51□□□□□ -2.01
TDA11P38854 YML037CYML037C 1023 nt2.51□□□□□ -2.01
TDA11P38854 YML094C-AYML094C-A 402 nt2.51□□□□□ -2.01
TDA11P38854 ADI1YMR009W 540 nt2.51□□□□□ -2.01
TDA11P38854 MTG1YMR097C 1104 nt2.51□□□□□ -2.01
TDA11P38854 SRT1YMR101C 1032 nt2.51□□□□□ -2.01
TDA11P38854 INO4YOL108C 456 nt2.51□□□□□ -2.01
TDA11P38854 ATP3YBR039W 936 nt2.51□□□□□ -2.01
TDA11P38854 SNX41YDR425W 1878 nt2.51□□□□□ -2.01
TDA11P38854 YDR239CYDR239C 2364 nt2.51□□□□□ -2.01
TDA11P38854 MDM36YPR083W 1740 nt2.51□□□□□ -2.01
TDA11P38854 SVL3YPL032C 2478 nt2.5□□□□□ -2.01
TDA11P38854 YDR170W-AYDR170W-A 1323 nt2.5□□□□□ -2.01
TDA11P38854 YBL005W-AYBL005W-A 1323 nt2.5□□□□□ -2.01
TDA11P38854 YMR046CYMR046C 1323 nt2.5□□□□□ -2.01
TDA11P38854 YNL284C-AYNL284C-A 1323 nt2.5□□□□□ -2.01
TDA11P38854 HMO1YDR174W 741 nt2.5□□□□□ -2.01
TDA11P38854 FMN1YDR236C 657 nt2.5□□□□□ -2.01
TDA11P38854 DPP1YDR284C 870 nt2.5□□□□□ -2.01
TDA11P38854 YFR054CYFR054C 579 nt2.5□□□□□ -2.01
TDA11P38854 YGL117WYGL117W 798 nt2.5□□□□□ -2.01
TDA11P38854 tW(CCA)G1tW(CCA)G1 72 nt2.5□□□□□ -2.01
TDA11P38854 tW(CCA)G2tW(CCA)G2 72 nt2.5□□□□□ -2.01
TDA11P38854 tW(CCA)JtW(CCA)J 72 nt2.5□□□□□ -2.01
TDA11P38854 tW(CCA)KtW(CCA)K 72 nt2.5□□□□□ -2.01
TDA11P38854 tW(CCA)MtW(CCA)M 72 nt2.5□□□□□ -2.01
TDA11P38854 tW(CCA)PtW(CCA)P 72 nt2.5□□□□□ -2.01
TDA11P38854 YAL026C-AYAL026C-A 438 nt2.5□□□□□ -2.01
TDA11P38854 YBL055CYBL055C 1257 nt2.5□□□□□ -2.01
TDA11P38854 ATP11YNL315C 957 nt2.5□□□□□ -2.01
TDA11P38854 YBR209WYBR209W 318 nt2.5□□□□□ -2.01
TDA11P38854 UTP14YML093W 2700 nt2.5□□□□□ -2.01
TDA11P38854 YOL057WYOL057W 2136 nt2.5□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 17.5 ms