Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SCNN1AP37088 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
SCNN1AP37088 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
SCNN1AP37088 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
SCNN1AP37088 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.83■■□□□ 1.08
SCNN1AP37088 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.83■■□□□ 1.08
SCNN1AP37088 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SCNN1AP37088 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SCNN1AP37088 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SCNN1AP37088 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.82■■□□□ 1.08
SCNN1AP37088 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.82■■□□□ 1.08
SCNN1AP37088 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SCNN1AP37088 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
SCNN1AP37088 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.82■■□□□ 1.08
SCNN1AP37088 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.82■■□□□ 1.08
SCNN1AP37088 AC137761.2-201ENST00000561729 223 ntBASIC21.82■■□□□ 1.08
SCNN1AP37088 AC145350.3-201ENST00000569033 163 ntBASIC21.82■■□□□ 1.08
SCNN1AP37088 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.82■■□□□ 1.08
SCNN1AP37088 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SCNN1AP37088 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SCNN1AP37088 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SCNN1AP37088 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SCNN1AP37088 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SCNN1AP37088 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.81■■□□□ 1.08
SCNN1AP37088 RBM17P2-201ENST00000616397 1405 ntBASIC21.81■■□□□ 1.08
SCNN1AP37088 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCNN1AP37088 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCNN1AP37088 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SCNN1AP37088 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.81■■□□□ 1.08
SCNN1AP37088 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCNN1AP37088 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCNN1AP37088 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.81■■□□□ 1.08
SCNN1AP37088 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.81■■□□□ 1.08
SCNN1AP37088 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.81■■□□□ 1.08
SCNN1AP37088 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
SCNN1AP37088 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.81■■□□□ 1.08
SCNN1AP37088 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.81■■□□□ 1.08
SCNN1AP37088 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCNN1AP37088 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SCNN1AP37088 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.81■■□□□ 1.08
SCNN1AP37088 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
SCNN1AP37088 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.8■■□□□ 1.08
SCNN1AP37088 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
SCNN1AP37088 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.8■■□□□ 1.08
SCNN1AP37088 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SCNN1AP37088 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.8■■□□□ 1.08
SCNN1AP37088 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCNN1AP37088 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.8■■□□□ 1.08
SCNN1AP37088 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCNN1AP37088 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SCNN1AP37088 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.8■■□□□ 1.08
SCNN1AP37088 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SCNN1AP37088 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.8■■□□□ 1.08
SCNN1AP37088 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.8■■□□□ 1.08
SCNN1AP37088 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCNN1AP37088 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCNN1AP37088 AF106564.1-201ENST00000607058 2553 ntBASIC21.8■■□□□ 1.08
SCNN1AP37088 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCNN1AP37088 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SCNN1AP37088 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.8■■□□□ 1.08
SCNN1AP37088 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCNN1AP37088 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCNN1AP37088 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SCNN1AP37088 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SCNN1AP37088 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.79■■□□□ 1.08
SCNN1AP37088 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCNN1AP37088 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCNN1AP37088 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SCNN1AP37088 AC005229.4-201ENST00000610085 2198 ntBASIC21.78■■□□□ 1.08
SCNN1AP37088 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCNN1AP37088 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCNN1AP37088 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SCNN1AP37088 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.78■■□□□ 1.08
SCNN1AP37088 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SCNN1AP37088 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.78■■□□□ 1.08
SCNN1AP37088 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.78■■□□□ 1.08
SCNN1AP37088 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.78■■□□□ 1.08
SCNN1AP37088 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCNN1AP37088 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCNN1AP37088 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SCNN1AP37088 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SCNN1AP37088 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.77■■□□□ 1.08
SCNN1AP37088 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCNN1AP37088 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SCNN1AP37088 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SCNN1AP37088 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCNN1AP37088 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.77■■□□□ 1.08
SCNN1AP37088 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.77■■□□□ 1.08
SCNN1AP37088 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.77■■□□□ 1.08
SCNN1AP37088 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCNN1AP37088 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
SCNN1AP37088 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.77■■□□□ 1.08
SCNN1AP37088 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCNN1AP37088 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.77■■□□□ 1.08
SCNN1AP37088 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SCNN1AP37088 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SCNN1AP37088 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.07
SCNN1AP37088 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SCNN1AP37088 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.77■■□□□ 1.07
SCNN1AP37088 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms