Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCLP35914 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
HMGCLP35914 AL049796.1-201ENST00000565336 1766 ntBASIC20.87■□□□□ 0.93
HMGCLP35914 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCLP35914 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCLP35914 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCLP35914 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
HMGCLP35914 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCLP35914 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCLP35914 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCLP35914 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCLP35914 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.86■□□□□ 0.93
HMGCLP35914 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
HMGCLP35914 AC016769.1-201ENST00000409132 1010 ntBASIC20.86■□□□□ 0.93
HMGCLP35914 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCLP35914 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.86■□□□□ 0.93
HMGCLP35914 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.86■□□□□ 0.93
HMGCLP35914 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.86■□□□□ 0.93
HMGCLP35914 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.86■□□□□ 0.93
HMGCLP35914 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.86■□□□□ 0.93
HMGCLP35914 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
HMGCLP35914 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
HMGCLP35914 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCLP35914 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCLP35914 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLP35914 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLP35914 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.85■□□□□ 0.93
HMGCLP35914 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
HMGCLP35914 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLP35914 AF106564.1-201ENST00000607058 2553 ntBASIC20.85■□□□□ 0.93
HMGCLP35914 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLP35914 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.85■□□□□ 0.93
HMGCLP35914 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLP35914 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
HMGCLP35914 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.85■□□□□ 0.93
HMGCLP35914 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.85■□□□□ 0.93
HMGCLP35914 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.85■□□□□ 0.93
HMGCLP35914 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLP35914 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLP35914 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
HMGCLP35914 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
HMGCLP35914 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLP35914 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
HMGCLP35914 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.85■□□□□ 0.93
HMGCLP35914 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
HMGCLP35914 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
HMGCLP35914 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.85■□□□□ 0.93
HMGCLP35914 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.84■□□□□ 0.93
HMGCLP35914 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGCLP35914 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.84■□□□□ 0.93
HMGCLP35914 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.84■□□□□ 0.93
HMGCLP35914 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.84■□□□□ 0.93
HMGCLP35914 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HMGCLP35914 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HMGCLP35914 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.84■□□□□ 0.93
HMGCLP35914 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.84■□□□□ 0.93
HMGCLP35914 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.84■□□□□ 0.93
HMGCLP35914 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.84■□□□□ 0.93
HMGCLP35914 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.84■□□□□ 0.93
HMGCLP35914 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.84■□□□□ 0.93
HMGCLP35914 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HMGCLP35914 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.84■□□□□ 0.93
HMGCLP35914 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMGCLP35914 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
HMGCLP35914 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HMGCLP35914 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.83■□□□□ 0.93
HMGCLP35914 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMGCLP35914 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMGCLP35914 AC243732.1-201ENST00000612648 864 ntBASIC20.83■□□□□ 0.93
HMGCLP35914 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.83■□□□□ 0.93
HMGCLP35914 RARRES2P11-201ENST00000635158 484 ntBASIC20.83■□□□□ 0.93
HMGCLP35914 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HMGCLP35914 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HMGCLP35914 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
HMGCLP35914 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.83■□□□□ 0.92
HMGCLP35914 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HMGCLP35914 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCLP35914 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HMGCLP35914 AC245052.3-201ENST00000450182 901 ntBASIC20.82■□□□□ 0.92
HMGCLP35914 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.82■□□□□ 0.92
HMGCLP35914 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.82■□□□□ 0.92
HMGCLP35914 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCLP35914 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCLP35914 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCLP35914 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCLP35914 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.82■□□□□ 0.92
HMGCLP35914 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCLP35914 AC005229.4-201ENST00000610085 2198 ntBASIC20.82■□□□□ 0.92
HMGCLP35914 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
HMGCLP35914 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.81■□□□□ 0.92
HMGCLP35914 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCLP35914 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
HMGCLP35914 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
HMGCLP35914 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
HMGCLP35914 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.81■□□□□ 0.92
HMGCLP35914 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCLP35914 AC092437.1-201ENST00000624794 1048 ntBASIC20.81■□□□□ 0.92
HMGCLP35914 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCLP35914 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
HMGCLP35914 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms