Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.68■□□□□ 0.42
COL8A2P25067 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
COL8A2P25067 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
COL8A2P25067 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COL8A2P25067 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL8A2P25067 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.67■□□□□ 0.42
COL8A2P25067 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL8A2P25067 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL8A2P25067 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL8A2P25067 RBM17P2-201ENST00000616397 1405 ntBASIC17.67■□□□□ 0.42
COL8A2P25067 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL8A2P25067 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL8A2P25067 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.67■□□□□ 0.42
COL8A2P25067 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
COL8A2P25067 AC133552.2-202ENST00000575694 574 ntBASIC17.67■□□□□ 0.42
COL8A2P25067 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.67■□□□□ 0.42
COL8A2P25067 C11orf96-202ENST00000528572 1834 ntBASIC17.67■□□□□ 0.42
COL8A2P25067 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL8A2P25067 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL8A2P25067 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.66■□□□□ 0.42
COL8A2P25067 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL8A2P25067 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL8A2P25067 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL8A2P25067 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL8A2P25067 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL8A2P25067 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL8A2P25067 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL8A2P25067 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL8A2P25067 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL8A2P25067 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
COL8A2P25067 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL8A2P25067 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL8A2P25067 GUSBP6-202ENST00000438529 1198 ntBASIC17.66■□□□□ 0.42
COL8A2P25067 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL8A2P25067 AC007322.4-201ENST00000509611 723 ntBASIC17.66■□□□□ 0.42
COL8A2P25067 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.66■□□□□ 0.42
COL8A2P25067 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.66■□□□□ 0.42
COL8A2P25067 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.66■□□□□ 0.42
COL8A2P25067 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL8A2P25067 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.66■□□□□ 0.42
COL8A2P25067 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
COL8A2P25067 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.66■□□□□ 0.42
COL8A2P25067 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL8A2P25067 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL8A2P25067 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL8A2P25067 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL8A2P25067 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.66■□□□□ 0.42
COL8A2P25067 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.66■□□□□ 0.42
COL8A2P25067 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL8A2P25067 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
COL8A2P25067 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL8A2P25067 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.66■□□□□ 0.42
COL8A2P25067 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.66■□□□□ 0.42
COL8A2P25067 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL8A2P25067 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL8A2P25067 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.66■□□□□ 0.42
COL8A2P25067 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.66■□□□□ 0.42
COL8A2P25067 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
COL8A2P25067 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.65■□□□□ 0.42
COL8A2P25067 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL8A2P25067 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL8A2P25067 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
COL8A2P25067 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL8A2P25067 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
COL8A2P25067 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL8A2P25067 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.65■□□□□ 0.42
COL8A2P25067 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.65■□□□□ 0.42
COL8A2P25067 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
COL8A2P25067 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.65■□□□□ 0.42
COL8A2P25067 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL8A2P25067 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL8A2P25067 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL8A2P25067 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
COL8A2P25067 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL8A2P25067 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
COL8A2P25067 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL8A2P25067 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL8A2P25067 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.65■□□□□ 0.42
COL8A2P25067 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
COL8A2P25067 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL8A2P25067 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.64■□□□□ 0.41
COL8A2P25067 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
COL8A2P25067 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL8A2P25067 SLC29A4P1-201ENST00000398760 971 ntBASIC17.64■□□□□ 0.41
COL8A2P25067 CYP2T1P-201ENST00000432607 1285 ntBASIC17.64■□□□□ 0.41
COL8A2P25067 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.64■□□□□ 0.41
COL8A2P25067 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
COL8A2P25067 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.64■□□□□ 0.41
COL8A2P25067 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
COL8A2P25067 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.64■□□□□ 0.41
COL8A2P25067 AL138781.1-201ENST00000566567 1274 ntBASIC17.64■□□□□ 0.41
COL8A2P25067 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL8A2P25067 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL8A2P25067 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
COL8A2P25067 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL8A2P25067 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL8A2P25067 AL137060.1-201ENST00000618151 2648 ntBASIC17.64■□□□□ 0.41
COL8A2P25067 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
COL8A2P25067 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.64■□□□□ 0.41
COL8A2P25067 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms