Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PEPDP12955 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PEPDP12955 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.29■□□□□ 0.68
PEPDP12955 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PEPDP12955 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PEPDP12955 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PEPDP12955 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PEPDP12955 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.29■□□□□ 0.68
PEPDP12955 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PEPDP12955 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.29■□□□□ 0.68
PEPDP12955 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PEPDP12955 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.29■□□□□ 0.68
PEPDP12955 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PEPDP12955 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.29■□□□□ 0.68
PEPDP12955 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PEPDP12955 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PEPDP12955 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PEPDP12955 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PEPDP12955 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.29■□□□□ 0.68
PEPDP12955 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PEPDP12955 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PEPDP12955 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PEPDP12955 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PEPDP12955 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PEPDP12955 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PEPDP12955 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PEPDP12955 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PEPDP12955 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.28■□□□□ 0.68
PEPDP12955 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PEPDP12955 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.28■□□□□ 0.68
PEPDP12955 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.28■□□□□ 0.68
PEPDP12955 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.28■□□□□ 0.68
PEPDP12955 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.28■□□□□ 0.68
PEPDP12955 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PEPDP12955 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PEPDP12955 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PEPDP12955 AC055733.4-201ENST00000638462 1354 ntBASIC19.28■□□□□ 0.68
PEPDP12955 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PEPDP12955 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PEPDP12955 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
PEPDP12955 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PEPDP12955 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PEPDP12955 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PEPDP12955 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
PEPDP12955 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.27■□□□□ 0.68
PEPDP12955 FEM1AP4-201ENST00000443167 1987 ntBASIC19.27■□□□□ 0.68
PEPDP12955 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.27■□□□□ 0.68
PEPDP12955 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PEPDP12955 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.27■□□□□ 0.68
PEPDP12955 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.27■□□□□ 0.68
PEPDP12955 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.27■□□□□ 0.68
PEPDP12955 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PEPDP12955 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PEPDP12955 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PEPDP12955 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.27■□□□□ 0.67
PEPDP12955 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PEPDP12955 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PEPDP12955 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PEPDP12955 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.27■□□□□ 0.67
PEPDP12955 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PEPDP12955 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PEPDP12955 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.26■□□□□ 0.67
PEPDP12955 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PEPDP12955 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.26■□□□□ 0.67
PEPDP12955 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PEPDP12955 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PEPDP12955 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PEPDP12955 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.26■□□□□ 0.67
PEPDP12955 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.26■□□□□ 0.67
PEPDP12955 AP004607.4-201ENST00000530158 1459 ntBASIC19.26■□□□□ 0.67
PEPDP12955 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PEPDP12955 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PEPDP12955 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PEPDP12955 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.25■□□□□ 0.67
PEPDP12955 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.25■□□□□ 0.67
PEPDP12955 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PEPDP12955 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
PEPDP12955 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PEPDP12955 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PEPDP12955 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PEPDP12955 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.25■□□□□ 0.67
PEPDP12955 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.25■□□□□ 0.67
PEPDP12955 KRT87P-202ENST00000534226 1464 ntBASIC19.25■□□□□ 0.67
PEPDP12955 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PEPDP12955 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.25■□□□□ 0.67
PEPDP12955 KRT19P1-201ENST00000405746 1186 ntBASIC19.25■□□□□ 0.67
PEPDP12955 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.25■□□□□ 0.67
PEPDP12955 AC022517.1-201ENST00000592429 346 ntBASIC19.25■□□□□ 0.67
PEPDP12955 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PEPDP12955 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.25■□□□□ 0.67
PEPDP12955 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PEPDP12955 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.25■□□□□ 0.67
PEPDP12955 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PEPDP12955 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PEPDP12955 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PEPDP12955 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PEPDP12955 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PEPDP12955 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PEPDP12955 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
PEPDP12955 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms