Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HOXC6P09630 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.77■■□□□ 1.4
HOXC6P09630 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.39
HOXC6P09630 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
HOXC6P09630 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.76■■□□□ 1.39
HOXC6P09630 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
HOXC6P09630 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
HOXC6P09630 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
HOXC6P09630 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HOXC6P09630 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.76■■□□□ 1.39
HOXC6P09630 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HOXC6P09630 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
HOXC6P09630 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
HOXC6P09630 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HOXC6P09630 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
HOXC6P09630 AL589743.5-201ENST00000616611 1050 ntBASIC23.76■■□□□ 1.39
HOXC6P09630 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HOXC6P09630 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.76■■□□□ 1.39
HOXC6P09630 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.76■■□□□ 1.39
HOXC6P09630 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.76■■□□□ 1.39
HOXC6P09630 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.76■■□□□ 1.39
HOXC6P09630 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HOXC6P09630 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.75■■□□□ 1.39
HOXC6P09630 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HOXC6P09630 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
HOXC6P09630 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HOXC6P09630 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
HOXC6P09630 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.75■■□□□ 1.39
HOXC6P09630 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.75■■□□□ 1.39
HOXC6P09630 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
HOXC6P09630 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
HOXC6P09630 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.75■■□□□ 1.39
HOXC6P09630 AC245052.3-201ENST00000450182 901 ntBASIC23.75■■□□□ 1.39
HOXC6P09630 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
HOXC6P09630 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC23.75■■□□□ 1.39
HOXC6P09630 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC23.75■■□□□ 1.39
HOXC6P09630 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HOXC6P09630 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.75■■□□□ 1.39
HOXC6P09630 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.75■■□□□ 1.39
HOXC6P09630 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
HOXC6P09630 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.74■■□□□ 1.39
HOXC6P09630 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.74■■□□□ 1.39
HOXC6P09630 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
HOXC6P09630 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
HOXC6P09630 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.74■■□□□ 1.39
HOXC6P09630 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HOXC6P09630 MCRIP2P1-201ENST00000394346 511 ntBASIC23.74■■□□□ 1.39
HOXC6P09630 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.74■■□□□ 1.39
HOXC6P09630 RNF121-214ENST00000533380 870 ntTSL 3 BASIC23.74■■□□□ 1.39
HOXC6P09630 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.74■■□□□ 1.39
HOXC6P09630 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HOXC6P09630 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HOXC6P09630 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
HOXC6P09630 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HOXC6P09630 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
HOXC6P09630 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
HOXC6P09630 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
HOXC6P09630 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.73■■□□□ 1.39
HOXC6P09630 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC23.73■■□□□ 1.39
HOXC6P09630 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
HOXC6P09630 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
HOXC6P09630 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
HOXC6P09630 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
HOXC6P09630 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HOXC6P09630 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
HOXC6P09630 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC23.73■■□□□ 1.39
HOXC6P09630 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
HOXC6P09630 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HOXC6P09630 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.72■■□□□ 1.39
HOXC6P09630 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HOXC6P09630 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
HOXC6P09630 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
HOXC6P09630 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
HOXC6P09630 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
HOXC6P09630 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
HOXC6P09630 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
HOXC6P09630 PNMA6B-201ENST00000538162 1200 ntBASIC23.72■■□□□ 1.39
HOXC6P09630 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC23.72■■□□□ 1.39
HOXC6P09630 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC23.72■■□□□ 1.39
HOXC6P09630 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
HOXC6P09630 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
HOXC6P09630 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HOXC6P09630 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.72■■□□□ 1.39
HOXC6P09630 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HOXC6P09630 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
HOXC6P09630 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
HOXC6P09630 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
HOXC6P09630 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
HOXC6P09630 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23.71■■□□□ 1.39
HOXC6P09630 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
HOXC6P09630 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
HOXC6P09630 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC23.71■■□□□ 1.39
HOXC6P09630 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
HOXC6P09630 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
HOXC6P09630 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
HOXC6P09630 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
HOXC6P09630 AC092053.2-201ENST00000640557 1818 ntBASIC23.7■■□□□ 1.39
HOXC6P09630 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.7■■□□□ 1.39
HOXC6P09630 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
HOXC6P09630 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms