Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TPM3P06753 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TPM3P06753 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TPM3P06753 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC23.38■■□□□ 1.33
TPM3P06753 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TPM3P06753 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TPM3P06753 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC23.38■■□□□ 1.33
TPM3P06753 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TPM3P06753 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC23.38■■□□□ 1.33
TPM3P06753 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC23.38■■□□□ 1.33
TPM3P06753 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC23.38■■□□□ 1.33
TPM3P06753 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TPM3P06753 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC23.38■■□□□ 1.33
TPM3P06753 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TPM3P06753 OR2I1P-207ENST00000453522 948 ntBASIC23.38■■□□□ 1.33
TPM3P06753 AC010141.3-201ENST00000456659 717 ntBASIC23.38■■□□□ 1.33
TPM3P06753 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
TPM3P06753 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TPM3P06753 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
TPM3P06753 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.38■■□□□ 1.33
TPM3P06753 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TPM3P06753 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
TPM3P06753 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TPM3P06753 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
TPM3P06753 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC23.37■■□□□ 1.33
TPM3P06753 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TPM3P06753 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC23.37■■□□□ 1.33
TPM3P06753 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TPM3P06753 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TPM3P06753 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TPM3P06753 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.37■■□□□ 1.33
TPM3P06753 AC006455.2-201ENST00000429931 906 ntBASIC23.37■■□□□ 1.33
TPM3P06753 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
TPM3P06753 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TPM3P06753 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.37■■□□□ 1.33
TPM3P06753 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TPM3P06753 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TPM3P06753 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
TPM3P06753 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TPM3P06753 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TPM3P06753 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TPM3P06753 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TPM3P06753 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.36■■□□□ 1.33
TPM3P06753 ME2-218ENST00000640965 2476 ntTSL 5 BASIC23.36■■□□□ 1.33
TPM3P06753 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TPM3P06753 AFG3L1P-217ENST00000557444 2447 ntBASIC23.36■■□□□ 1.33
TPM3P06753 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.36■■□□□ 1.33
TPM3P06753 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TPM3P06753 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TPM3P06753 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TPM3P06753 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
TPM3P06753 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TPM3P06753 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TPM3P06753 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
TPM3P06753 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TPM3P06753 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TPM3P06753 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.35■■□□□ 1.33
TPM3P06753 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.35■■□□□ 1.33
TPM3P06753 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TPM3P06753 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TPM3P06753 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TPM3P06753 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TPM3P06753 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TPM3P06753 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.35■■□□□ 1.33
TPM3P06753 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.35■■□□□ 1.33
TPM3P06753 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TPM3P06753 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TPM3P06753 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
TPM3P06753 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TPM3P06753 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
TPM3P06753 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC23.34■■□□□ 1.33
TPM3P06753 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TPM3P06753 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC23.34■■□□□ 1.33
TPM3P06753 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
TPM3P06753 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
TPM3P06753 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.34■■□□□ 1.33
TPM3P06753 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.34■■□□□ 1.33
TPM3P06753 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TPM3P06753 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TPM3P06753 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TPM3P06753 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
TPM3P06753 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TPM3P06753 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TPM3P06753 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TPM3P06753 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
TPM3P06753 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
TPM3P06753 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC23.33■■□□□ 1.33
TPM3P06753 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TPM3P06753 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC23.33■■□□□ 1.33
TPM3P06753 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TPM3P06753 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC23.33■■□□□ 1.33
TPM3P06753 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TPM3P06753 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.33■■□□□ 1.33
TPM3P06753 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.33■■□□□ 1.33
TPM3P06753 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TPM3P06753 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TPM3P06753 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TPM3P06753 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
TPM3P06753 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TPM3P06753 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms