Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
APOA4P06727 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
APOA4P06727 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
APOA4P06727 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
APOA4P06727 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
APOA4P06727 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.91■□□□□ 0.94
APOA4P06727 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
APOA4P06727 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
APOA4P06727 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
APOA4P06727 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
APOA4P06727 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
APOA4P06727 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
APOA4P06727 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
APOA4P06727 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
APOA4P06727 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
APOA4P06727 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.9■□□□□ 0.94
APOA4P06727 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
APOA4P06727 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
APOA4P06727 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
APOA4P06727 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
APOA4P06727 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
APOA4P06727 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.9■□□□□ 0.94
APOA4P06727 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.9■□□□□ 0.94
APOA4P06727 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
APOA4P06727 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
APOA4P06727 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
APOA4P06727 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.9■□□□□ 0.94
APOA4P06727 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
APOA4P06727 AC073130.3-201ENST00000624389 2278 ntBASIC20.89■□□□□ 0.94
APOA4P06727 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
APOA4P06727 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
APOA4P06727 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
APOA4P06727 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
APOA4P06727 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
APOA4P06727 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
APOA4P06727 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
APOA4P06727 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
APOA4P06727 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
APOA4P06727 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.89■□□□□ 0.93
APOA4P06727 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.89■□□□□ 0.93
APOA4P06727 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.89■□□□□ 0.93
APOA4P06727 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.89■□□□□ 0.93
APOA4P06727 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.89■□□□□ 0.93
APOA4P06727 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
APOA4P06727 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
APOA4P06727 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
APOA4P06727 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.89■□□□□ 0.93
APOA4P06727 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
APOA4P06727 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
APOA4P06727 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.88■□□□□ 0.93
APOA4P06727 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
APOA4P06727 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
APOA4P06727 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.88■□□□□ 0.93
APOA4P06727 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
APOA4P06727 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
APOA4P06727 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
APOA4P06727 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
APOA4P06727 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.88■□□□□ 0.93
APOA4P06727 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
APOA4P06727 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.88■□□□□ 0.93
APOA4P06727 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.88■□□□□ 0.93
APOA4P06727 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
APOA4P06727 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
APOA4P06727 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
APOA4P06727 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.88■□□□□ 0.93
APOA4P06727 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.88■□□□□ 0.93
APOA4P06727 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
APOA4P06727 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
APOA4P06727 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
APOA4P06727 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
APOA4P06727 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.87■□□□□ 0.93
APOA4P06727 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
APOA4P06727 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
APOA4P06727 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
APOA4P06727 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.87■□□□□ 0.93
APOA4P06727 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
APOA4P06727 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.87■□□□□ 0.93
APOA4P06727 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.87■□□□□ 0.93
APOA4P06727 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
APOA4P06727 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
APOA4P06727 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
APOA4P06727 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
APOA4P06727 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
APOA4P06727 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
APOA4P06727 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
APOA4P06727 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
APOA4P06727 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
APOA4P06727 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.86■□□□□ 0.93
APOA4P06727 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
APOA4P06727 AC079140.4-201ENST00000507448 529 ntBASIC20.86■□□□□ 0.93
APOA4P06727 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.86■□□□□ 0.93
APOA4P06727 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
APOA4P06727 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
APOA4P06727 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
APOA4P06727 AL157384.1-201ENST00000445995 2473 ntBASIC20.86■□□□□ 0.93
APOA4P06727 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
APOA4P06727 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
APOA4P06727 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
APOA4P06727 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
APOA4P06727 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms