Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PDGFAP04085 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFAP04085 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.49■□□□□ 0.71
PDGFAP04085 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFAP04085 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.49■□□□□ 0.71
PDGFAP04085 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.49■□□□□ 0.71
PDGFAP04085 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.49■□□□□ 0.71
PDGFAP04085 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.49■□□□□ 0.71
PDGFAP04085 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.49■□□□□ 0.71
PDGFAP04085 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFAP04085 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.49■□□□□ 0.71
PDGFAP04085 AC069236.1-201ENST00000604339 616 ntBASIC19.49■□□□□ 0.71
PDGFAP04085 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFAP04085 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFAP04085 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.49■□□□□ 0.71
PDGFAP04085 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFAP04085 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFAP04085 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFAP04085 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFAP04085 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFAP04085 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFAP04085 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.48■□□□□ 0.71
PDGFAP04085 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFAP04085 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFAP04085 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFAP04085 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.48■□□□□ 0.71
PDGFAP04085 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PDGFAP04085 ESRRAP1-201ENST00000400596 1257 ntBASIC19.48■□□□□ 0.71
PDGFAP04085 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFAP04085 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.48■□□□□ 0.71
PDGFAP04085 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.48■□□□□ 0.71
PDGFAP04085 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFAP04085 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFAP04085 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PDGFAP04085 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFAP04085 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFAP04085 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.48■□□□□ 0.71
PDGFAP04085 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFAP04085 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFAP04085 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.48■□□□□ 0.71
PDGFAP04085 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFAP04085 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFAP04085 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFAP04085 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFAP04085 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFAP04085 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFAP04085 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PDGFAP04085 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.47■□□□□ 0.71
PDGFAP04085 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.47■□□□□ 0.71
PDGFAP04085 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.47■□□□□ 0.71
PDGFAP04085 AL034346.1-201ENST00000568244 1277 ntBASIC19.47■□□□□ 0.71
PDGFAP04085 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFAP04085 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFAP04085 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PDGFAP04085 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFAP04085 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.47■□□□□ 0.71
PDGFAP04085 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFAP04085 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFAP04085 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.47■□□□□ 0.71
PDGFAP04085 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFAP04085 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDGFAP04085 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDGFAP04085 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDGFAP04085 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDGFAP04085 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDGFAP04085 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.46■□□□□ 0.71
PDGFAP04085 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.46■□□□□ 0.71
PDGFAP04085 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.46■□□□□ 0.71
PDGFAP04085 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.46■□□□□ 0.71
PDGFAP04085 GCSHP5-201ENST00000443090 522 ntBASIC19.46■□□□□ 0.71
PDGFAP04085 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.46■□□□□ 0.71
PDGFAP04085 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.46■□□□□ 0.71
PDGFAP04085 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.46■□□□□ 0.71
PDGFAP04085 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDGFAP04085 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDGFAP04085 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDGFAP04085 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PDGFAP04085 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDGFAP04085 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDGFAP04085 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.46■□□□□ 0.71
PDGFAP04085 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.46■□□□□ 0.71
PDGFAP04085 AC092667.1-201ENST00000434301 2586 ntBASIC19.45■□□□□ 0.7
PDGFAP04085 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.45■□□□□ 0.7
PDGFAP04085 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFAP04085 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFAP04085 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFAP04085 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.45■□□□□ 0.7
PDGFAP04085 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFAP04085 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.45■□□□□ 0.7
PDGFAP04085 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.45■□□□□ 0.7
PDGFAP04085 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.45■□□□□ 0.7
PDGFAP04085 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.45■□□□□ 0.7
PDGFAP04085 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFAP04085 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFAP04085 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PDGFAP04085 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFAP04085 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFAP04085 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.45■□□□□ 0.7
PDGFAP04085 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.45■□□□□ 0.7
PDGFAP04085 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms