Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.88■□□□□ 0.61
RAF1P04049 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.88■□□□□ 0.61
RAF1P04049 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAF1P04049 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAF1P04049 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RAF1P04049 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.88■□□□□ 0.61
RAF1P04049 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAF1P04049 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RAF1P04049 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RAF1P04049 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAF1P04049 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAF1P04049 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAF1P04049 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAF1P04049 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAF1P04049 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAF1P04049 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.87■□□□□ 0.61
RAF1P04049 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAF1P04049 KRT18P61-201ENST00000585825 1298 ntBASIC18.87■□□□□ 0.61
RAF1P04049 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.87■□□□□ 0.61
RAF1P04049 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.87■□□□□ 0.61
RAF1P04049 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RAF1P04049 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAF1P04049 Z98882.1-201ENST00000622160 2253 ntBASIC18.86■□□□□ 0.61
RAF1P04049 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAF1P04049 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.86■□□□□ 0.61
RAF1P04049 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAF1P04049 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAF1P04049 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAF1P04049 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAF1P04049 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAF1P04049 ABHD17AP1-201ENST00000358206 933 ntBASIC18.86■□□□□ 0.61
RAF1P04049 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.86■□□□□ 0.61
RAF1P04049 AL355802.2-201ENST00000402069 882 ntBASIC18.86■□□□□ 0.61
RAF1P04049 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAF1P04049 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.86■□□□□ 0.61
RAF1P04049 AL109923.1-201ENST00000618799 583 ntBASIC18.86■□□□□ 0.61
RAF1P04049 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAF1P04049 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAF1P04049 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAF1P04049 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAF1P04049 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAF1P04049 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.85■□□□□ 0.61
RAF1P04049 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAF1P04049 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.85■□□□□ 0.61
RAF1P04049 KRT19P1-201ENST00000405746 1186 ntBASIC18.85■□□□□ 0.61
RAF1P04049 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAF1P04049 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAF1P04049 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.85■□□□□ 0.61
RAF1P04049 TPRG1LP1-201ENST00000598702 760 ntBASIC18.85■□□□□ 0.61
RAF1P04049 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RAF1P04049 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAF1P04049 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAF1P04049 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAF1P04049 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.85■□□□□ 0.61
RAF1P04049 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.85■□□□□ 0.61
RAF1P04049 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAF1P04049 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.84■□□□□ 0.61
RAF1P04049 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAF1P04049 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAF1P04049 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAF1P04049 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAF1P04049 AC007952.6-201ENST00000573168 2673 ntBASIC18.84■□□□□ 0.61
RAF1P04049 AC003957.1-201ENST00000625108 2673 ntBASIC18.84■□□□□ 0.61
RAF1P04049 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.84■□□□□ 0.61
RAF1P04049 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RAF1P04049 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RAF1P04049 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.84■□□□□ 0.61
RAF1P04049 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAF1P04049 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.84■□□□□ 0.61
RAF1P04049 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.84■□□□□ 0.61
RAF1P04049 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.84■□□□□ 0.61
RAF1P04049 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAF1P04049 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RAF1P04049 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.84■□□□□ 0.61
RAF1P04049 AP004607.4-201ENST00000530158 1459 ntBASIC18.84■□□□□ 0.61
RAF1P04049 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.83■□□□□ 0.61
RAF1P04049 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAF1P04049 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAF1P04049 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
RAF1P04049 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAF1P04049 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAF1P04049 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAF1P04049 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAF1P04049 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.83■□□□□ 0.61
RAF1P04049 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.83■□□□□ 0.61
RAF1P04049 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
RAF1P04049 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.83■□□□□ 0.6
RAF1P04049 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAF1P04049 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.83■□□□□ 0.6
RAF1P04049 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.83■□□□□ 0.6
RAF1P04049 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RAF1P04049 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.83■□□□□ 0.6
RAF1P04049 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.83■□□□□ 0.6
RAF1P04049 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.83■□□□□ 0.6
RAF1P04049 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAF1P04049 AC004854.2-201ENST00000608450 1441 ntBASIC18.83■□□□□ 0.6
RAF1P04049 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAF1P04049 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAF1P04049 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAF1P04049 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms