Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND1P03886 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND1P03886 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND1P03886 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.67■□□□□ 0.74
MT-ND1P03886 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND1P03886 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND1P03886 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND1P03886 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND1P03886 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND1P03886 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.66■□□□□ 0.74
MT-ND1P03886 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND1P03886 OR2I1P-207ENST00000453522 948 ntBASIC19.66■□□□□ 0.74
MT-ND1P03886 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.66■□□□□ 0.74
MT-ND1P03886 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.66■□□□□ 0.74
MT-ND1P03886 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.66■□□□□ 0.74
MT-ND1P03886 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND1P03886 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND1P03886 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND1P03886 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
MT-ND1P03886 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.66■□□□□ 0.74
MT-ND1P03886 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND1P03886 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND1P03886 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.66■□□□□ 0.74
MT-ND1P03886 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND1P03886 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.66■□□□□ 0.74
MT-ND1P03886 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.66■□□□□ 0.74
MT-ND1P03886 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND1P03886 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND1P03886 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND1P03886 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
MT-ND1P03886 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MT-ND1P03886 AC112907.3-201ENST00000577781 2400 ntBASIC19.65■□□□□ 0.74
MT-ND1P03886 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.65■□□□□ 0.74
MT-ND1P03886 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MT-ND1P03886 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
MT-ND1P03886 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MT-ND1P03886 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MT-ND1P03886 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.65■□□□□ 0.74
MT-ND1P03886 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.65■□□□□ 0.74
MT-ND1P03886 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.65■□□□□ 0.74
MT-ND1P03886 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.65■□□□□ 0.74
MT-ND1P03886 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MT-ND1P03886 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.65■□□□□ 0.74
MT-ND1P03886 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MT-ND1P03886 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.65■□□□□ 0.74
MT-ND1P03886 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.65■□□□□ 0.74
MT-ND1P03886 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
MT-ND1P03886 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
MT-ND1P03886 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
MT-ND1P03886 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.65■□□□□ 0.74
MT-ND1P03886 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
MT-ND1P03886 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
MT-ND1P03886 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
MT-ND1P03886 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.64■□□□□ 0.74
MT-ND1P03886 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MT-ND1P03886 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MT-ND1P03886 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MT-ND1P03886 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
MT-ND1P03886 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MT-ND1P03886 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MT-ND1P03886 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.64■□□□□ 0.73
MT-ND1P03886 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
MT-ND1P03886 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MT-ND1P03886 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
MT-ND1P03886 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.64■□□□□ 0.73
MT-ND1P03886 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.64■□□□□ 0.73
MT-ND1P03886 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.64■□□□□ 0.73
MT-ND1P03886 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
MT-ND1P03886 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
MT-ND1P03886 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MT-ND1P03886 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.64■□□□□ 0.73
MT-ND1P03886 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
MT-ND1P03886 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.64■□□□□ 0.73
MT-ND1P03886 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MT-ND1P03886 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MT-ND1P03886 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MT-ND1P03886 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MT-ND1P03886 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MT-ND1P03886 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MT-ND1P03886 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
MT-ND1P03886 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
MT-ND1P03886 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MT-ND1P03886 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MT-ND1P03886 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MT-ND1P03886 AP004607.7-201ENST00000527152 1677 ntBASIC19.63■□□□□ 0.73
MT-ND1P03886 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
MT-ND1P03886 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MT-ND1P03886 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.63■□□□□ 0.73
MT-ND1P03886 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MT-ND1P03886 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MT-ND1P03886 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MT-ND1P03886 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MT-ND1P03886 AC010141.3-201ENST00000456659 717 ntBASIC19.63■□□□□ 0.73
MT-ND1P03886 AC010525.1-201ENST00000585559 441 ntBASIC19.63■□□□□ 0.73
MT-ND1P03886 AC087239.1-201ENST00000622671 572 ntBASIC19.63■□□□□ 0.73
MT-ND1P03886 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MT-ND1P03886 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MT-ND1P03886 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MT-ND1P03886 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MT-ND1P03886 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms