Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
COL4A1P02462 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
COL4A1P02462 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC25.82■■□□□ 1.72
COL4A1P02462 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC25.82■■□□□ 1.72
COL4A1P02462 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC25.82■■□□□ 1.72
COL4A1P02462 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
COL4A1P02462 GATS-209ENST00000454084 1030 ntTSL 3 BASIC25.82■■□□□ 1.72
COL4A1P02462 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC25.82■■□□□ 1.72
COL4A1P02462 MMAB-206ENST00000540016 945 ntTSL 3 BASIC25.82■■□□□ 1.72
COL4A1P02462 NARF-205ENST00000412079 1760 ntTSL 5 BASIC25.82■■□□□ 1.72
COL4A1P02462 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
COL4A1P02462 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC25.82■■□□□ 1.72
COL4A1P02462 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC25.81■■□□□ 1.72
COL4A1P02462 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC25.81■■□□□ 1.72
COL4A1P02462 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
COL4A1P02462 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
COL4A1P02462 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC25.81■■□□□ 1.72
COL4A1P02462 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC25.81■■□□□ 1.72
COL4A1P02462 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC25.81■■□□□ 1.72
COL4A1P02462 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC25.81■■□□□ 1.72
COL4A1P02462 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC25.81■■□□□ 1.72
COL4A1P02462 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC25.81■■□□□ 1.72
COL4A1P02462 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
COL4A1P02462 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
COL4A1P02462 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
COL4A1P02462 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL4A1P02462 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
COL4A1P02462 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
COL4A1P02462 SERPINH1P1-201ENST00000419794 1249 ntBASIC25.8■■□□□ 1.72
COL4A1P02462 PBX1-209ENST00000485769 834 ntTSL 2 BASIC25.8■■□□□ 1.72
COL4A1P02462 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC25.8■■□□□ 1.72
COL4A1P02462 GALC-202ENST00000393568 2054 ntTSL 2 BASIC25.8■■□□□ 1.72
COL4A1P02462 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
COL4A1P02462 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
COL4A1P02462 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL4A1P02462 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC25.8■■□□□ 1.72
COL4A1P02462 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC25.8■■□□□ 1.72
COL4A1P02462 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC25.8■■□□□ 1.72
COL4A1P02462 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC25.8■■□□□ 1.72
COL4A1P02462 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
COL4A1P02462 VMO1-204ENST00000441199 741 ntTSL 2 BASIC25.8■■□□□ 1.72
COL4A1P02462 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC25.8■■□□□ 1.72
COL4A1P02462 CASP6-205ENST00000505486 538 ntTSL 4 BASIC25.8■■□□□ 1.72
COL4A1P02462 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL4A1P02462 AP003097.1-201ENST00000530657 1135 ntBASIC25.8■■□□□ 1.72
COL4A1P02462 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC25.8■■□□□ 1.72
COL4A1P02462 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC25.8■■□□□ 1.72
COL4A1P02462 KLF2-202ENST00000592003 564 ntTSL 3 BASIC25.8■■□□□ 1.72
COL4A1P02462 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
COL4A1P02462 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL4A1P02462 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL4A1P02462 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
COL4A1P02462 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC25.79■■□□□ 1.72
COL4A1P02462 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC25.79■■□□□ 1.72
COL4A1P02462 AC128676.1-201ENST00000454392 318 ntBASIC25.79■■□□□ 1.72
COL4A1P02462 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC25.79■■□□□ 1.72
COL4A1P02462 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
COL4A1P02462 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
COL4A1P02462 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
COL4A1P02462 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC25.78■■□□□ 1.72
COL4A1P02462 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
COL4A1P02462 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC25.78■■□□□ 1.72
COL4A1P02462 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
COL4A1P02462 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC25.78■■□□□ 1.72
COL4A1P02462 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
COL4A1P02462 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC25.78■■□□□ 1.72
COL4A1P02462 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
COL4A1P02462 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.78■■□□□ 1.72
COL4A1P02462 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC25.78■■□□□ 1.72
COL4A1P02462 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
COL4A1P02462 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
COL4A1P02462 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
COL4A1P02462 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
COL4A1P02462 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
COL4A1P02462 PTPA-214ENST00000423100 988 ntTSL 2 BASIC25.77■■□□□ 1.72
COL4A1P02462 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
COL4A1P02462 AC233263.1-201ENST00000578059 224 ntBASIC25.77■■□□□ 1.72
COL4A1P02462 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC25.77■■□□□ 1.72
COL4A1P02462 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
COL4A1P02462 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
COL4A1P02462 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.77■■□□□ 1.72
COL4A1P02462 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
COL4A1P02462 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
COL4A1P02462 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
COL4A1P02462 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
COL4A1P02462 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
COL4A1P02462 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
COL4A1P02462 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
COL4A1P02462 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
COL4A1P02462 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
COL4A1P02462 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
COL4A1P02462 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
COL4A1P02462 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC25.76■■□□□ 1.71
COL4A1P02462 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
COL4A1P02462 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC25.76■■□□□ 1.71
COL4A1P02462 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC25.76■■□□□ 1.71
COL4A1P02462 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC25.76■■□□□ 1.71
COL4A1P02462 AC026366.1-201ENST00000488803 879 ntBASIC25.76■■□□□ 1.71
COL4A1P02462 MMD2-204ENST00000612910 778 ntTSL 5 BASIC25.76■■□□□ 1.71
COL4A1P02462 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms