Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CNOT4O95628 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT4O95628 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.54■□□□□ 0.56
CNOT4O95628 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT4O95628 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT4O95628 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.54■□□□□ 0.56
CNOT4O95628 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CNOT4O95628 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT4O95628 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT4O95628 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT4O95628 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.54■□□□□ 0.56
CNOT4O95628 AC006970.2-201ENST00000450065 779 ntBASIC18.54■□□□□ 0.56
CNOT4O95628 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.54■□□□□ 0.56
CNOT4O95628 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.54■□□□□ 0.56
CNOT4O95628 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CNOT4O95628 AC104771.1-201ENST00000603335 964 ntBASIC18.54■□□□□ 0.56
CNOT4O95628 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.54■□□□□ 0.56
CNOT4O95628 AC231657.2-201ENST00000624556 255 ntBASIC18.54■□□□□ 0.56
CNOT4O95628 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT4O95628 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT4O95628 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CNOT4O95628 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT4O95628 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT4O95628 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT4O95628 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.54■□□□□ 0.56
CNOT4O95628 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNOT4O95628 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNOT4O95628 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNOT4O95628 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNOT4O95628 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNOT4O95628 AC010542.4-201ENST00000563151 1910 ntBASIC18.53■□□□□ 0.56
CNOT4O95628 AC026471.6-201ENST00000622954 1905 ntBASIC18.53■□□□□ 0.56
CNOT4O95628 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNOT4O95628 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNOT4O95628 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.53■□□□□ 0.56
CNOT4O95628 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNOT4O95628 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNOT4O95628 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CNOT4O95628 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CNOT4O95628 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.53■□□□□ 0.56
CNOT4O95628 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.53■□□□□ 0.56
CNOT4O95628 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
CNOT4O95628 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CNOT4O95628 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CNOT4O95628 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.53■□□□□ 0.56
CNOT4O95628 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CNOT4O95628 C11orf96-202ENST00000528572 1834 ntBASIC18.53■□□□□ 0.56
CNOT4O95628 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNOT4O95628 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
CNOT4O95628 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNOT4O95628 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CNOT4O95628 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNOT4O95628 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CNOT4O95628 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
CNOT4O95628 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CNOT4O95628 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.52■□□□□ 0.56
CNOT4O95628 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNOT4O95628 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNOT4O95628 AL355802.2-201ENST00000402069 882 ntBASIC18.52■□□□□ 0.56
CNOT4O95628 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.52■□□□□ 0.56
CNOT4O95628 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.52■□□□□ 0.56
CNOT4O95628 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.52■□□□□ 0.56
CNOT4O95628 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.52■□□□□ 0.56
CNOT4O95628 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNOT4O95628 LINC00565-201ENST00000562710 2331 ntBASIC18.52■□□□□ 0.56
CNOT4O95628 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CNOT4O95628 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.51■□□□□ 0.55
CNOT4O95628 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CNOT4O95628 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CNOT4O95628 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CNOT4O95628 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNOT4O95628 ABHD17AP1-201ENST00000358206 933 ntBASIC18.51■□□□□ 0.55
CNOT4O95628 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.51■□□□□ 0.55
CNOT4O95628 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.51■□□□□ 0.55
CNOT4O95628 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.51■□□□□ 0.55
CNOT4O95628 AL109923.1-201ENST00000618799 583 ntBASIC18.51■□□□□ 0.55
CNOT4O95628 AC010536.3-201ENST00000620306 533 ntBASIC18.51■□□□□ 0.55
CNOT4O95628 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CNOT4O95628 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CNOT4O95628 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
CNOT4O95628 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CNOT4O95628 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CNOT4O95628 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CNOT4O95628 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNOT4O95628 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNOT4O95628 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.5■□□□□ 0.55
CNOT4O95628 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
CNOT4O95628 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CNOT4O95628 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.5■□□□□ 0.55
CNOT4O95628 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CNOT4O95628 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.5■□□□□ 0.55
CNOT4O95628 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.5■□□□□ 0.55
CNOT4O95628 SLC7A5P2-201ENST00000553010 536 ntBASIC18.5■□□□□ 0.55
CNOT4O95628 DUX4L16-201ENST00000555130 1264 ntBASIC18.5■□□□□ 0.55
CNOT4O95628 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.5■□□□□ 0.55
CNOT4O95628 AC243732.1-201ENST00000612648 864 ntBASIC18.5■□□□□ 0.55
CNOT4O95628 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.5■□□□□ 0.55
CNOT4O95628 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CNOT4O95628 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.5■□□□□ 0.55
CNOT4O95628 AC013268.1-206ENST00000638368 961 ntBASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms