Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.74■□□□□ 0.91
CBX6O95503 AC008764.7-201ENST00000593779 1081 ntBASIC20.74■□□□□ 0.91
CBX6O95503 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CBX6O95503 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.74■□□□□ 0.91
CBX6O95503 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CBX6O95503 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CBX6O95503 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CBX6O95503 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CBX6O95503 C17orf82-201ENST00000623772 1530 ntBASIC20.73■□□□□ 0.91
CBX6O95503 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CBX6O95503 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CBX6O95503 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.73■□□□□ 0.91
CBX6O95503 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.73■□□□□ 0.91
CBX6O95503 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.73■□□□□ 0.91
CBX6O95503 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.73■□□□□ 0.91
CBX6O95503 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.73■□□□□ 0.91
CBX6O95503 AC099791.2-201ENST00000605725 427 ntBASIC20.73■□□□□ 0.91
CBX6O95503 AC011298.3-201ENST00000615796 283 ntBASIC20.73■□□□□ 0.91
CBX6O95503 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.73■□□□□ 0.91
CBX6O95503 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CBX6O95503 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.73■□□□□ 0.91
CBX6O95503 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
CBX6O95503 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CBX6O95503 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CBX6O95503 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CBX6O95503 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CBX6O95503 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CBX6O95503 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CBX6O95503 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CBX6O95503 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CBX6O95503 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CBX6O95503 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.72■□□□□ 0.91
CBX6O95503 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.72■□□□□ 0.91
CBX6O95503 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.72■□□□□ 0.91
CBX6O95503 AL138724.1-201ENST00000606771 1088 ntBASIC20.72■□□□□ 0.91
CBX6O95503 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.72■□□□□ 0.91
CBX6O95503 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.72■□□□□ 0.91
CBX6O95503 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CBX6O95503 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CBX6O95503 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CBX6O95503 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CBX6O95503 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CBX6O95503 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CBX6O95503 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.71■□□□□ 0.91
CBX6O95503 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.71■□□□□ 0.91
CBX6O95503 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.71■□□□□ 0.91
CBX6O95503 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.71■□□□□ 0.91
CBX6O95503 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.71■□□□□ 0.91
CBX6O95503 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CBX6O95503 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CBX6O95503 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CBX6O95503 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CBX6O95503 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.71■□□□□ 0.91
CBX6O95503 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CBX6O95503 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.71■□□□□ 0.91
CBX6O95503 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.71■□□□□ 0.91
CBX6O95503 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CBX6O95503 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CBX6O95503 AC087289.5-201ENST00000586076 3175 ntBASIC20.71■□□□□ 0.91
CBX6O95503 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CBX6O95503 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CBX6O95503 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CBX6O95503 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CBX6O95503 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CBX6O95503 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CBX6O95503 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CBX6O95503 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CBX6O95503 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CBX6O95503 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.7■□□□□ 0.9
CBX6O95503 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CBX6O95503 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CBX6O95503 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CBX6O95503 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.7■□□□□ 0.9
CBX6O95503 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CBX6O95503 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.7■□□□□ 0.9
CBX6O95503 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CBX6O95503 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CBX6O95503 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CBX6O95503 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CBX6O95503 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CBX6O95503 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.69■□□□□ 0.9
CBX6O95503 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CBX6O95503 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.69■□□□□ 0.9
CBX6O95503 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CBX6O95503 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CBX6O95503 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CBX6O95503 AC099791.1-201ENST00000416440 715 ntBASIC20.69■□□□□ 0.9
CBX6O95503 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.69■□□□□ 0.9
CBX6O95503 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.69■□□□□ 0.9
CBX6O95503 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.69■□□□□ 0.9
CBX6O95503 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CBX6O95503 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CBX6O95503 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CBX6O95503 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.69■□□□□ 0.9
CBX6O95503 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.69■□□□□ 0.9
CBX6O95503 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.69■□□□□ 0.9
CBX6O95503 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.69■□□□□ 0.9
CBX6O95503 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CBX6O95503 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CBX6O95503 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms