Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX6O95475 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX6O95475 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SIX6O95475 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SIX6O95475 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX6O95475 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SIX6O95475 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX6O95475 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX6O95475 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.48■□□□□ 0.39
SIX6O95475 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SIX6O95475 THA1P-201ENST00000590384 1145 ntBASIC17.48■□□□□ 0.39
SIX6O95475 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
SIX6O95475 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.48■□□□□ 0.39
SIX6O95475 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.48■□□□□ 0.39
SIX6O95475 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SIX6O95475 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.48■□□□□ 0.39
SIX6O95475 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX6O95475 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SIX6O95475 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.47■□□□□ 0.39
SIX6O95475 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX6O95475 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.47■□□□□ 0.39
SIX6O95475 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX6O95475 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.47■□□□□ 0.39
SIX6O95475 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX6O95475 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SIX6O95475 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX6O95475 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.47■□□□□ 0.39
SIX6O95475 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SIX6O95475 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX6O95475 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX6O95475 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX6O95475 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX6O95475 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SIX6O95475 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SIX6O95475 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SIX6O95475 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX6O95475 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIX6O95475 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.46■□□□□ 0.39
SIX6O95475 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIX6O95475 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.46■□□□□ 0.39
SIX6O95475 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SIX6O95475 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SIX6O95475 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC17.46■□□□□ 0.39
SIX6O95475 MIR639-201ENST00000384974 98 ntBASIC17.46■□□□□ 0.39
SIX6O95475 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SIX6O95475 RPS2-202ENST00000526522 924 ntTSL 2 BASIC17.46■□□□□ 0.39
SIX6O95475 AC079089.2-201ENST00000531211 1277 ntBASIC17.46■□□□□ 0.39
SIX6O95475 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
SIX6O95475 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SIX6O95475 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIX6O95475 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIX6O95475 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SIX6O95475 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.45■□□□□ 0.38
SIX6O95475 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.45■□□□□ 0.38
SIX6O95475 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX6O95475 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX6O95475 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX6O95475 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SIX6O95475 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.45■□□□□ 0.38
SIX6O95475 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX6O95475 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.45■□□□□ 0.38
SIX6O95475 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
SIX6O95475 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SIX6O95475 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX6O95475 SNX5-217ENST00000606557 1087 ntBASIC17.45■□□□□ 0.38
SIX6O95475 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX6O95475 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SIX6O95475 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SIX6O95475 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX6O95475 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.45■□□□□ 0.38
SIX6O95475 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.45■□□□□ 0.38
SIX6O95475 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX6O95475 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SIX6O95475 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SIX6O95475 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.45■□□□□ 0.38
SIX6O95475 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.45■□□□□ 0.38
SIX6O95475 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.44■□□□□ 0.38
SIX6O95475 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.44■□□□□ 0.38
SIX6O95475 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX6O95475 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
SIX6O95475 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.44■□□□□ 0.38
SIX6O95475 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.44■□□□□ 0.38
SIX6O95475 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.44■□□□□ 0.38
SIX6O95475 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX6O95475 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX6O95475 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
SIX6O95475 AL512408.1-201ENST00000569378 2000 ntBASIC17.44■□□□□ 0.38
SIX6O95475 BX323043.1-201ENST00000641006 1765 ntBASIC17.44■□□□□ 0.38
SIX6O95475 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX6O95475 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX6O95475 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX6O95475 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX6O95475 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX6O95475 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX6O95475 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
SIX6O95475 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.44■□□□□ 0.38
SIX6O95475 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX6O95475 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX6O95475 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIX6O95475 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms