Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
RAPGEF3O95398 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC31.81■■■□□ 2.68
RAPGEF3O95398 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
RAPGEF3O95398 GCK-205ENST00000437084 1385 ntTSL 5 BASIC31.81■■■□□ 2.68
RAPGEF3O95398 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
RAPGEF3O95398 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC31.8■■■□□ 2.68
RAPGEF3O95398 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC31.8■■■□□ 2.68
RAPGEF3O95398 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
RAPGEF3O95398 KRT18P68-201ENST00000392293 1000 ntBASIC31.8■■■□□ 2.68
RAPGEF3O95398 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
RAPGEF3O95398 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC31.8■■■□□ 2.68
RAPGEF3O95398 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC31.8■■■□□ 2.68
RAPGEF3O95398 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC31.8■■■□□ 2.68
RAPGEF3O95398 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
RAPGEF3O95398 ANOS2P-203ENST00000472227 1816 ntBASIC31.79■■■□□ 2.68
RAPGEF3O95398 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC31.79■■■□□ 2.68
RAPGEF3O95398 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
RAPGEF3O95398 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
RAPGEF3O95398 ARMC10P1-201ENST00000313754 855 ntBASIC31.79■■■□□ 2.68
RAPGEF3O95398 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC31.79■■■□□ 2.68
RAPGEF3O95398 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
RAPGEF3O95398 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
RAPGEF3O95398 AC133681.1-201ENST00000465482 601 ntBASIC31.79■■■□□ 2.68
RAPGEF3O95398 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC31.79■■■□□ 2.68
RAPGEF3O95398 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC31.79■■■□□ 2.68
RAPGEF3O95398 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
RAPGEF3O95398 CD177P1-201ENST00000606252 935 ntBASIC31.79■■■□□ 2.68
RAPGEF3O95398 AL023875.1-201ENST00000640777 796 ntBASIC31.79■■■□□ 2.68
RAPGEF3O95398 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
RAPGEF3O95398 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
RAPGEF3O95398 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC31.79■■■□□ 2.68
RAPGEF3O95398 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC31.79■■■□□ 2.68
RAPGEF3O95398 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC31.78■■■□□ 2.68
RAPGEF3O95398 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
RAPGEF3O95398 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC31.78■■■□□ 2.68
RAPGEF3O95398 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
RAPGEF3O95398 VMO1-204ENST00000441199 741 ntTSL 2 BASIC31.78■■■□□ 2.68
RAPGEF3O95398 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
RAPGEF3O95398 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
RAPGEF3O95398 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
RAPGEF3O95398 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
RAPGEF3O95398 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC31.77■■■□□ 2.68
RAPGEF3O95398 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC31.77■■■□□ 2.68
RAPGEF3O95398 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC31.77■■■□□ 2.68
RAPGEF3O95398 CRK-204ENST00000574295 1391 ntTSL 5 BASIC31.77■■■□□ 2.68
RAPGEF3O95398 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
RAPGEF3O95398 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
RAPGEF3O95398 CDV3P1-201ENST00000471403 739 ntBASIC31.76■■■□□ 2.67
RAPGEF3O95398 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC31.76■■■□□ 2.67
RAPGEF3O95398 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC31.76■■■□□ 2.67
RAPGEF3O95398 AL353708.3-201ENST00000610272 989 ntBASIC31.76■■■□□ 2.67
RAPGEF3O95398 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
RAPGEF3O95398 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
RAPGEF3O95398 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
RAPGEF3O95398 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
RAPGEF3O95398 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
RAPGEF3O95398 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
RAPGEF3O95398 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
RAPGEF3O95398 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC31.75■■■□□ 2.67
RAPGEF3O95398 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC31.75■■■□□ 2.67
RAPGEF3O95398 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC31.75■■■□□ 2.67
RAPGEF3O95398 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
RAPGEF3O95398 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC31.75■■■□□ 2.67
RAPGEF3O95398 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC31.75■■■□□ 2.67
RAPGEF3O95398 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
RAPGEF3O95398 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
RAPGEF3O95398 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
RAPGEF3O95398 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC31.74■■■□□ 2.67
RAPGEF3O95398 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
RAPGEF3O95398 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC31.74■■■□□ 2.67
RAPGEF3O95398 AP001412.1-201ENST00000608405 714 ntBASIC31.74■■■□□ 2.67
RAPGEF3O95398 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
RAPGEF3O95398 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
RAPGEF3O95398 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC31.74■■■□□ 2.67
RAPGEF3O95398 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
RAPGEF3O95398 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
RAPGEF3O95398 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
RAPGEF3O95398 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
RAPGEF3O95398 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
RAPGEF3O95398 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
RAPGEF3O95398 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
RAPGEF3O95398 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
RAPGEF3O95398 AC092068.2-201ENST00000590491 1708 ntBASIC31.73■■■□□ 2.67
RAPGEF3O95398 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
RAPGEF3O95398 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
RAPGEF3O95398 THEM4-205ENST00000489410 643 ntTSL 2 BASIC31.73■■■□□ 2.67
RAPGEF3O95398 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
RAPGEF3O95398 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC31.73■■■□□ 2.67
RAPGEF3O95398 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
RAPGEF3O95398 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC31.73■■■□□ 2.67
RAPGEF3O95398 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
RAPGEF3O95398 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC31.73■■■□□ 2.67
RAPGEF3O95398 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
RAPGEF3O95398 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
RAPGEF3O95398 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC31.72■■■□□ 2.67
RAPGEF3O95398 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC31.72■■■□□ 2.67
RAPGEF3O95398 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
RAPGEF3O95398 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC31.72■■■□□ 2.67
RAPGEF3O95398 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
RAPGEF3O95398 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC31.72■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms