Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VAPBO95292 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VAPBO95292 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
VAPBO95292 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.98■□□□□ 0.95
VAPBO95292 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VAPBO95292 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
VAPBO95292 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VAPBO95292 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.98■□□□□ 0.95
VAPBO95292 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
VAPBO95292 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VAPBO95292 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VAPBO95292 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.98■□□□□ 0.95
VAPBO95292 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.98■□□□□ 0.95
VAPBO95292 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VAPBO95292 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
VAPBO95292 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VAPBO95292 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VAPBO95292 AC027612.3-201ENST00000413684 1047 ntBASIC20.97■□□□□ 0.95
VAPBO95292 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VAPBO95292 AC079140.4-201ENST00000507448 529 ntBASIC20.97■□□□□ 0.95
VAPBO95292 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.97■□□□□ 0.95
VAPBO95292 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.97■□□□□ 0.95
VAPBO95292 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
VAPBO95292 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VAPBO95292 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VAPBO95292 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VAPBO95292 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.97■□□□□ 0.95
VAPBO95292 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
VAPBO95292 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
VAPBO95292 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
VAPBO95292 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VAPBO95292 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
VAPBO95292 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VAPBO95292 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
VAPBO95292 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VAPBO95292 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VAPBO95292 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.96■□□□□ 0.95
VAPBO95292 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.96■□□□□ 0.95
VAPBO95292 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
VAPBO95292 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
VAPBO95292 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VAPBO95292 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VAPBO95292 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VAPBO95292 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VAPBO95292 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
VAPBO95292 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.95■□□□□ 0.94
VAPBO95292 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VAPBO95292 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VAPBO95292 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VAPBO95292 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.95■□□□□ 0.94
VAPBO95292 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.95■□□□□ 0.94
VAPBO95292 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
VAPBO95292 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VAPBO95292 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.95■□□□□ 0.94
VAPBO95292 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
VAPBO95292 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VAPBO95292 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
VAPBO95292 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
VAPBO95292 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VAPBO95292 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
VAPBO95292 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VAPBO95292 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
VAPBO95292 AC061975.6-201ENST00000579045 1553 ntBASIC20.94■□□□□ 0.94
VAPBO95292 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VAPBO95292 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VAPBO95292 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.94■□□□□ 0.94
VAPBO95292 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
VAPBO95292 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.94■□□□□ 0.94
VAPBO95292 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
VAPBO95292 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VAPBO95292 AC073130.3-201ENST00000624389 2278 ntBASIC20.94■□□□□ 0.94
VAPBO95292 KRT87P-202ENST00000534226 1464 ntBASIC20.94■□□□□ 0.94
VAPBO95292 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VAPBO95292 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
VAPBO95292 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VAPBO95292 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.93■□□□□ 0.94
VAPBO95292 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VAPBO95292 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.93■□□□□ 0.94
VAPBO95292 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
VAPBO95292 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.93■□□□□ 0.94
VAPBO95292 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.93■□□□□ 0.94
VAPBO95292 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VAPBO95292 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.93■□□□□ 0.94
VAPBO95292 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VAPBO95292 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VAPBO95292 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VAPBO95292 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VAPBO95292 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VAPBO95292 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VAPBO95292 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
VAPBO95292 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VAPBO95292 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VAPBO95292 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
VAPBO95292 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VAPBO95292 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VAPBO95292 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VAPBO95292 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.92■□□□□ 0.94
VAPBO95292 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VAPBO95292 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VAPBO95292 LINC02228-203ENST00000641970 1355 ntBASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms