Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SCAF4O95104 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SCAF4O95104 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCAF4O95104 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCAF4O95104 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.03■□□□□ 0.32
SCAF4O95104 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.03■□□□□ 0.32
SCAF4O95104 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCAF4O95104 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCAF4O95104 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCAF4O95104 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCAF4O95104 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCAF4O95104 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.02■□□□□ 0.32
SCAF4O95104 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCAF4O95104 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCAF4O95104 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCAF4O95104 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCAF4O95104 AL136116.3-201ENST00000402907 1138 ntBASIC17.02■□□□□ 0.32
SCAF4O95104 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.02■□□□□ 0.32
SCAF4O95104 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCAF4O95104 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.02■□□□□ 0.31
SCAF4O95104 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.02■□□□□ 0.31
SCAF4O95104 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.02■□□□□ 0.31
SCAF4O95104 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
SCAF4O95104 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SCAF4O95104 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SCAF4O95104 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SCAF4O95104 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCAF4O95104 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SCAF4O95104 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.01■□□□□ 0.31
SCAF4O95104 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SCAF4O95104 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCAF4O95104 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCAF4O95104 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCAF4O95104 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SCAF4O95104 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.01■□□□□ 0.31
SCAF4O95104 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SCAF4O95104 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCAF4O95104 AC087239.1-201ENST00000622671 572 ntBASIC17.01■□□□□ 0.31
SCAF4O95104 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
SCAF4O95104 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.01■□□□□ 0.31
SCAF4O95104 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.01■□□□□ 0.31
SCAF4O95104 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCAF4O95104 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCAF4O95104 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCAF4O95104 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SCAF4O95104 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCAF4O95104 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SCAF4O95104 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.01■□□□□ 0.31
SCAF4O95104 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCAF4O95104 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCAF4O95104 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17■□□□□ 0.31
SCAF4O95104 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17■□□□□ 0.31
SCAF4O95104 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SCAF4O95104 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SCAF4O95104 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
SCAF4O95104 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SCAF4O95104 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
SCAF4O95104 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SCAF4O95104 MIR4466-201ENST00000606121 54 ntBASIC17■□□□□ 0.31
SCAF4O95104 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCAF4O95104 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17■□□□□ 0.31
SCAF4O95104 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17■□□□□ 0.31
SCAF4O95104 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCAF4O95104 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17■□□□□ 0.31
SCAF4O95104 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCAF4O95104 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCAF4O95104 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCAF4O95104 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCAF4O95104 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SCAF4O95104 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCAF4O95104 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SCAF4O95104 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCAF4O95104 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCAF4O95104 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.99■□□□□ 0.31
SCAF4O95104 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.99■□□□□ 0.31
SCAF4O95104 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCAF4O95104 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCAF4O95104 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCAF4O95104 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCAF4O95104 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.99■□□□□ 0.31
SCAF4O95104 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.99■□□□□ 0.31
SCAF4O95104 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCAF4O95104 SRD5A1P1-201ENST00000442297 786 ntBASIC16.99■□□□□ 0.31
SCAF4O95104 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.99■□□□□ 0.31
SCAF4O95104 AL512631.2-201ENST00000604634 923 ntBASIC16.99■□□□□ 0.31
SCAF4O95104 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCAF4O95104 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SCAF4O95104 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCAF4O95104 AL049796.1-201ENST00000565336 1766 ntBASIC16.99■□□□□ 0.31
SCAF4O95104 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
SCAF4O95104 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.99■□□□□ 0.31
SCAF4O95104 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCAF4O95104 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCAF4O95104 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SCAF4O95104 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SCAF4O95104 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SCAF4O95104 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SCAF4O95104 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCAF4O95104 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCAF4O95104 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms