Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.1■□□□□ 0.81
SNRNP200O75643 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SNRNP200O75643 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNRNP200O75643 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNRNP200O75643 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.1■□□□□ 0.81
SNRNP200O75643 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SNRNP200O75643 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SNRNP200O75643 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.09■□□□□ 0.81
SNRNP200O75643 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SNRNP200O75643 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.09■□□□□ 0.81
SNRNP200O75643 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SNRNP200O75643 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
SNRNP200O75643 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
SNRNP200O75643 AC080038.1-201ENST00000611274 1154 ntBASIC20.09■□□□□ 0.81
SNRNP200O75643 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.09■□□□□ 0.81
SNRNP200O75643 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SNRNP200O75643 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SNRNP200O75643 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SNRNP200O75643 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SNRNP200O75643 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SNRNP200O75643 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SNRNP200O75643 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SNRNP200O75643 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SNRNP200O75643 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.09■□□□□ 0.81
SNRNP200O75643 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SNRNP200O75643 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SNRNP200O75643 ID1-201ENST00000376105 1233 ntBASIC20.09■□□□□ 0.81
SNRNP200O75643 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.09■□□□□ 0.81
SNRNP200O75643 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.09■□□□□ 0.81
SNRNP200O75643 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.09■□□□□ 0.81
SNRNP200O75643 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.09■□□□□ 0.81
SNRNP200O75643 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SNRNP200O75643 AL024507.2-201ENST00000606070 2574 ntBASIC20.08■□□□□ 0.81
SNRNP200O75643 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SNRNP200O75643 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SNRNP200O75643 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SNRNP200O75643 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SNRNP200O75643 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.08■□□□□ 0.81
SNRNP200O75643 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.08■□□□□ 0.81
SNRNP200O75643 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.08■□□□□ 0.81
SNRNP200O75643 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.08■□□□□ 0.81
SNRNP200O75643 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SNRNP200O75643 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
SNRNP200O75643 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SNRNP200O75643 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
SNRNP200O75643 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.08■□□□□ 0.8
SNRNP200O75643 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SNRNP200O75643 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SNRNP200O75643 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SNRNP200O75643 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.08■□□□□ 0.8
SNRNP200O75643 AC120498.10-201ENST00000621827 505 ntBASIC20.08■□□□□ 0.8
SNRNP200O75643 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNRNP200O75643 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SNRNP200O75643 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SNRNP200O75643 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SNRNP200O75643 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNRNP200O75643 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.07■□□□□ 0.8
SNRNP200O75643 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SNRNP200O75643 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SNRNP200O75643 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SNRNP200O75643 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SNRNP200O75643 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNRNP200O75643 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNRNP200O75643 AC007322.3-201ENST00000426526 701 ntBASIC20.06■□□□□ 0.8
SNRNP200O75643 GUSBP6-202ENST00000438529 1198 ntBASIC20.06■□□□□ 0.8
SNRNP200O75643 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.06■□□□□ 0.8
SNRNP200O75643 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.06■□□□□ 0.8
SNRNP200O75643 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.06■□□□□ 0.8
SNRNP200O75643 AC098934.4-201ENST00000564127 592 ntBASIC20.06■□□□□ 0.8
SNRNP200O75643 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.06■□□□□ 0.8
SNRNP200O75643 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNRNP200O75643 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNRNP200O75643 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNRNP200O75643 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNRNP200O75643 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.06■□□□□ 0.8
SNRNP200O75643 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNRNP200O75643 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNRNP200O75643 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.06■□□□□ 0.8
SNRNP200O75643 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.06■□□□□ 0.8
SNRNP200O75643 AC079834.2-201ENST00000609776 1949 ntBASIC20.06■□□□□ 0.8
SNRNP200O75643 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SNRNP200O75643 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SNRNP200O75643 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
SNRNP200O75643 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.05■□□□□ 0.8
SNRNP200O75643 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.05■□□□□ 0.8
SNRNP200O75643 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SNRNP200O75643 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SNRNP200O75643 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNRNP200O75643 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
SNRNP200O75643 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SNRNP200O75643 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNRNP200O75643 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SNRNP200O75643 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.05■□□□□ 0.8
SNRNP200O75643 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.05■□□□□ 0.8
SNRNP200O75643 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SNRNP200O75643 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SNRNP200O75643 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNRNP200O75643 AC016405.3-201ENST00000607710 860 ntBASIC20.05■□□□□ 0.8
SNRNP200O75643 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SNRNP200O75643 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms